CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ogr18889
(
Ophisaurus gracilis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Ogr18889
T047577_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ogr18889
bHLH
87
137
RKRNERERQRVKCVNEGYAKLRYHLPAEYLEKRLSKVETLRAAIKYIRYLQ
Links
Other
bHLH
family TFs
Other
Ophisaurus gracilis
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_20633
Phytophthora parasitica
F443_20633
I
fgenesh_scip_prom.46568.10732
Phytophthora kernoviae
fgenesh_scip_prom.46568.10732
I
maker-pag1_scaffold_4-fgenesh-gene-0.4
Pythium aphanidermatum
maker-pag1_scaffold_4-fgenesh-gene-0.4
I
maker-par_contig_5774-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_5774-fgenesh-gene-0.0
I
maker-pir_contig_1153-fgenesh-gene-0.2
Pythium irregulare
maker-pir_contig_1153-fgenesh-gene-0.2
I
maker-pve_contig_695-fgenesh-gene-0.3
Pythium vexans
maker-pve_contig_695-fgenesh-gene-0.3
I
Physo132994
Phytophthora sojae
Physo132994
I
PITG_14364
Phytophthora infestans
PITG_14364
I
e_gw1.4.390.1
Phytophthora capsici
e_gw1.4.390.1
I
SPRG_12481
Saprolegnia parasitica
SPRG_12481
N
fgenesh_scip_prom.28083.4862
Phytophthora lateralis
fgenesh_scip_prom.28083.4862
N
maker-pag1_scaffold_490-fgenesh-gene-0.0
Pythium aphanidermatum
maker-pag1_scaffold_490-fgenesh-gene-0.0
N
maker-pir_contig_210-snap-gene-0.17
Pythium irregulare
maker-pir_contig_210-snap-gene-0.17
N
Phyra80899
Phytophthora ramorum
Phyra80899
N