Pm020642 (Prunus mume)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pm020642 T047635_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS01G0235700
M09894_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BHLH66_01 		0.914 1.000
MYC2
M01699_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8083 		0.890 0.896
PK18474.1
M01127_2.00 		Cannabis sativa
NRCACGTGCN
NGCACGTGYN		 PBM
Lambert et al.(2019)
pTH10273 		0.890 0.896
PK18474.1
M01768_2.00 		Cannabis sativa
NCACGWK
MWCGTGN		 PBM
Weirauch et al.(2014)
pTH9589 		0.890 0.896
MYC4
M01707_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8260 		0.890 0.875
MYC3
M01712_2.00 		Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK		 PBM
Weirauch et al.(2014)
pTH8854 		0.890 0.875
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.882 0.625
BHLH13
M01698_2.00 		Arabidopsis thaliana
MCACGTGV
BCACGTGK		 PBM
Weirauch et al.(2014)
pTH7565 		0.879 0.875
UNE10
M01705_2.00 		Arabidopsis thaliana
HCACGTGM
KCACGTGD		 PBM
Weirauch et al.(2014)
pTH8112 		0.843 0.500
PK09702.1
M01124_2.00 		Cannabis sativa
GCACGTGV
BCACGTGC		 PBM
Lambert et al.(2019)
pTH11374 		0.840 0.625
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm020642 bHLH 352 399

Links

Other bHLH family TFs
Other Prunus mume TFs

672 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSNLEG00000015896 Nomascus leucogenys ENSNLEG00000015896 N
Myotis_brandtii_ZNF239_10002120 Myotis brandtii Myotis_brandtii_ZNF239_10002120 N
ENSP00000341689 Macaca fascicularis ENSP00000341689 N
ZNF239 Vicugna pacos ENSVPAG00000012405 N
ENSTSYG00000004834 Tarsius syrichta ENSTSYG00000004834 N
ZNF239 Sus scrofa ENSSSCG00000029576 N
ZNF239 Pan troglodytes ENSPTRG00000022725 N
ENSPPYG00000002214 Pongo abelii ENSPPYG00000002214 N
ZNF239 Procavia capensis ENSPCAG00000006595 N
ZNF239 Oryctolagus cuniculus ENSOCUG00000010992 N
ENSOARG00000003720 Ovis aries ENSOARG00000003720 N
ZNF239 Bos taurus ENSBTAG00000019039 N
ENSMPUG00000020136 Mustela putorius furo ENSMPUG00000020136 N
ENSMMUG00000022433 Macaca mulatta ENSMMUG00000022433 N
ZNF239 Gorilla gorilla ENSGGOG00000001913 N
ZNF239 Homo sapiens ENSG00000196793 N
ZNF239 Felis catus ENSFCAG00000023538 N
ZNF239 Equus caballus ENSECAG00000003179 N
ZNF239 Dasypus novemcinctus ENSDNOG00000004406 N
ENSCSAG00000018415 Chlorocebus sabaeus ENSCSAG00000018415 N
ZNF239 Callithrix jacchus ENSCJAG00000016278 N
ZNF239 Canis familiaris ENSCAFG00000031910 N