CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm021043
(
Prunus mume
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Pm021043
T047639_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK18401.1
M01126_2.00
Cannabis sativa
NNNVCACGTGBN
NVCACGTGBNNN
PBM
Lambert et al.(2019)
pTH11272
0.911
0.882
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm021043
bHLH
57
107
RKIQKADREKLRRDRLNEQFLELGNVLDPDRPKNDKATILADTIQVLKDLT
Links
Other
bHLH
family TFs
Other
Prunus mume
TFs
65 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RO3G_06395
Rhizopus oryzae
RO3G_06395
I
0.000
fgeneshMC_pg.3_#_885
Mucor circinelloides
fgeneshMC_pg.3_#_885
I
0.000
UHOR_02465
Ustilago hordei
UHOR_02465
I
0.000
TRV_07259
Trichophyton verrucosum
TRV_07259
I
0.000
sr12730
Sporisorium reilianum
sr12730
N
0.000
EDP45324.1
Malassezia globosa
EDP45324.1
N
0.000
gw1.8.425.1
Phycomyces blakesleeanus
gw1.8.425.1
N
0.000
fgeneshPB_pg.3__11
Phycomyces blakesleeanus
fgeneshPB_pg.3__11
N
0.000
fgeneshPB_pg.2__345
Phycomyces blakesleeanus
fgeneshPB_pg.2__345
N
0.000
fgeneshMC_pg.8_#_88
Mucor circinelloides
fgeneshMC_pg.8_#_88
N
0.000
fgeneshMC_pg.4_#_663
Mucor circinelloides
fgeneshMC_pg.4_#_663
N
0.000
fgeneshMC_pg.1_#_1575
Mucor circinelloides
fgeneshMC_pg.1_#_1575
N
0.000
estExt_fgeneshPB_pg.C_50592
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_50592
N
0.000
estExt_fgeneshPB_pg.C_440039
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_440039
N
0.000
estExt_fgeneshMC_pg.C_30057
Mucor circinelloides
estExt_fgeneshMC_pg.C_30057
N
0.000
RO3G_02446
Rhizopus oryzae
RO3G_02446
N
0.000
PSEUBRA_SCAF2g02695
Pseudozyma brasiliensis
PSEUBRA_SCAF2g02695
N
0.000
MSY001_2707
Malassezia sympodialis
MSY001_2707
N
0.000
MELLADRAFT_31636
Melampsora laricipopulina
MELLADRAFT_31636
N
0.000
K437DRAFT_222727
Tilletiaria anomala
K437DRAFT_222727
N
0.000
GLOINDRAFT_44505
Rhizophagus irregularis
GLOINDRAFT_44505
N
0.000
RO3G_16953
Rhizopus oryzae
RO3G_16953
N
0.000
RO3G_14274
Rhizopus oryzae
RO3G_14274
N
0.000
RO3G_09726
Rhizopus oryzae
RO3G_09726
N
0.000
RO3G_06899
Rhizopus oryzae
RO3G_06899
N
0.000
RO3G_05037
Rhizopus oryzae
RO3G_05037
N
0.000
RO3G_04904
Rhizopus oryzae
RO3G_04904
N
0.000