Pm028606 (Prunus mume)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pm028606 T047672_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH28
M06742_2.00 		Arabidopsis thaliana
NNNYGTACGGAH
DTCCGTACRNNN		 Dap-seq
OMalley et al.(2016)
bHLH28_col_a 		0.856 0.740
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm028606 bHLH 306 355

Links

Other bHLH family TFs
Other Prunus mume TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BHLH28 Arabidopsis thaliana AT5G46830 D 0.856
cassava29800.valid.m1 Manihot esculenta cassava29800.valid.m1 I 0.844
SapurV1A.0003s0670 Salix purpurea SapurV1A.0003s0670 I 0.844
cassava32651.m1 Manihot esculenta cassava32651.m1 I 0.844
mgf001993m Mimulus guttatus mgf001993m I 0.844
Aquca_037_00261 Aquilegia coerulea Aquca_037_00261 I 0.844
Bostr.28243s0053 Boechera stricta Bostr.28243s0053 I 0.856
Bostr.7365s0026 Boechera stricta Bostr.7365s0026 I 0.844
Cagra.4923s0009 Capsella grandiflora Cagra.4923s0009 I 0.844
Carubv10001082m.g Capsella rubella Carubv10001082m.g I 0.844
Ciclev10019749m.g Citrus clementina Ciclev10019749m.g I 0.844
Eucgr.B00713 Eucalyptus grandis Eucgr.B00713 I 0.914
Eucgr.E00019 Eucalyptus grandis Eucgr.E00019 I 0.844
evm.TU.supercontig_141.19 Carica papaya evm.TU.supercontig_141.19 I 0.844
gene01894-v1.0-hybrid Fragaria vesca gene01894-v1.0-hybrid I 0.856
gene18651-v1.0-hybrid Fragaria vesca gene18651-v1.0-hybrid I 0.844
Gorai.001G151700 Gossypium raimondii Gorai.001G151700 I 0.844
Gorai.004G149500 Gossypium raimondii Gorai.004G149500 I 0.844
Gorai.007G111800 Gossypium raimondii Gorai.007G111800 I 0.844
Gorai.008G128800 Gossypium raimondii Gorai.008G128800 I 0.844
MDP0000137325 Malus domestica MDP0000137325 I 0.914
MDP0000183948 Malus domestica MDP0000183948 I 0.914
MDP0000224302 Malus domestica MDP0000224302 I 0.844
MDP0000242554 Malus domestica MDP0000242554 I 0.844
MDP0000442310 Malus domestica MDP0000442310 I 0.914
MDP0000710285 Malus domestica MDP0000710285 I 0.914
MDP0000729514 Malus domestica MDP0000729514 I 0.844
MDP0000859492 Malus domestica MDP0000859492 I 0.844
MDP0000900024 Malus domestica MDP0000900024 I 0.844
orange1.1g046178m.g Citrus sinensis orange1.1g046178m.g I 0.844
ATNIG1 Arabidopsis lyrata Al_scaffold_0008_132 I 0.856
PRUPE_ppa022201mg Prunus persica PRUPE_ppa022201mg I 0.914
GLYMA07G05740 Glycine max GLYMA07G05740 I 0.844
GLYMA16G02320 Glycine max GLYMA16G02320 I 0.844
GSMUA_Achr1G18910_001 Musa acuminata GSMUA_Achr1G18910_001 I 0.844
MTR_8g024770 Medicago truncatula MTR_8g024770 I 0.856
MTR_8g024790 Medicago truncatula MTR_8g024790 I 0.856
PGSC0003DMG400012237 Solanum tuberosum PGSC0003DMG400012237 I 0.856
PGSC0003DMG400018332 Solanum tuberosum PGSC0003DMG400018332 I 0.844
POPTR_0002s17750 Populus trichocarpa POPTR_0002s17750 I 0.844
PRUPE_ppa004680mg Prunus persica PRUPE_ppa004680mg I 0.844
PRUPE_ppa005343mg Prunus persica PRUPE_ppa005343mg I 0.856
PRUPE_ppa015634mg Prunus persica PRUPE_ppa015634mg I 0.903
PRUPE_ppa016220mg Prunus persica PRUPE_ppa016220mg I 0.914
PRUPE_ppa022165mg Prunus persica PRUPE_ppa022165mg I 0.914
27964.m000356 Ricinus communis 27964.m000356 I 0.844
PRUPE_ppa025417mg Prunus persica PRUPE_ppa025417mg I 0.914
Pm023735 Prunus mume Pm023735 I 0.914
27964.m000352 Ricinus communis 27964.m000352 I 0.844
Pm029399 Prunus mume Pm029399 I 0.856
Pm028607 Prunus mume Pm028607 I 0.914
Pm028605 Prunus mume Pm028605 I 0.914
Pm028604 Prunus mume Pm028604 I 0.914
Pm023738 Prunus mume Pm023738 I 0.914
PRUPE_ppa027182mg Prunus persica PRUPE_ppa027182mg I 0.914
Ca_17603 Cicer arietinum Ca_17603 I 0.843
VIT_15s0048g02820 Vitis vinifera VIT_15s0048g02820 I 0.844
VIT_02s0025g02610 Vitis vinifera VIT_02s0025g02610 I 0.844
TCM_005064 Theobroma cacao TCM_005064 I 0.844
Solyc08g083170.1 Solanum lycopersicum Solyc08g083170.1 I 0.856
Solyc01g096370.2 Solanum lycopersicum Solyc01g096370.2 I 0.844
MDP0000140864 Malus domestica MDP0000140864 N 0.886
MDP0000135282 Malus domestica MDP0000135282 N 0.866
MDP0000788304 Malus domestica MDP0000788304 N 0.894
Aquca_028_00148 Aquilegia coerulea Aquca_028_00148 N 0.848
MDP0000907218 Malus domestica MDP0000907218 N 0.870