cassava37032.valid.m1 (Manihot esculenta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 cassava37032.valid.m1 T048067_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ILR3
M01714_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH7211 		0.886 0.865
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava37032.valid.m1 bHLH 76 127

Links

Other bHLH family TFs
Other Manihot esculenta TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB98 Arabidopsis thaliana AT4G18770 D
cassava19706.m1 Manihot esculenta cassava19706.m1 I
cassava33974.m1 Manihot esculenta cassava33974.m1 I
30147.m013937 Ricinus communis 30147.m013937 I
Pm024743 Prunus mume Pm024743 I
Cla019490 Citrullus lanatus Cla019490 I
Ca_17294 Cicer arietinum Ca_17294 I
Ca_17087 Cicer arietinum Ca_17087 I
Ca_07482 Cicer arietinum Ca_07482 I
MYB98 Vitis vinifera VIT_17s0000g08550 I
TRIUR3_12421 Triticum urartu TRIUR3_12421 I
Traes_7DS_E27ECBC6E Triticum aestivum Traes_7DS_E27ECBC6E I
Traes_7BS_D28CCE3B8 Triticum aestivum Traes_7BS_D28CCE3B8 I
Traes_7AS_A337F362A Triticum aestivum Traes_7AS_A337F362A I
Traes_1DL_918A8F357 Triticum aestivum Traes_1DL_918A8F357 I
Traes_1BL_4D9406708 Triticum aestivum Traes_1BL_4D9406708 I
TCM_012087 Theobroma cacao TCM_012087 I
Si039046m.g Setaria italica Si039046m.g I
Lus10002384.g Linum usitatissimum Lus10002384.g I
Thhalv10026824m.g Eutrema salsugineum Thhalv10026824m.g I
Pavir.J37434 Panicum virgatum Pavir.J37434 I
Pavir.J25000 Panicum virgatum Pavir.J25000 I
Pavir.J02718 Panicum virgatum Pavir.J02718 I
Pavir.J02497 Panicum virgatum Pavir.J02497 I
orange1.1g046859m.g Citrus sinensis orange1.1g046859m.g I
MDP0000215359 Malus domestica MDP0000215359 I
Lus10042111.g Linum usitatissimum Lus10042111.g I
Sb01g005100 Sorghum bicolor Sb01g005100 I
Gorai.008G295800 Gossypium raimondii Gorai.008G295800 I
gene32198-v1.0-hybrid Fragaria vesca gene32198-v1.0-hybrid I
Eucgr.B00301 Eucalyptus grandis Eucgr.B00301 I
Ciclev10024427m.g Citrus clementina Ciclev10024427m.g I
Carubv10006734m.g Capsella rubella Carubv10006734m.g I
Cagra.4306s0015 Capsella grandiflora Cagra.4306s0015 I
Bostr.30275s0352 Boechera stricta Bostr.30275s0352 I
Cucsa.196850 Cucumis sativus Cucsa.196850 I
F775_22212 Aegilops tauschii F775_22212 I
PRUPE_ppa026791mg Prunus persica PRUPE_ppa026791mg I
MTR_5g049190 Medicago truncatula MTR_5g049190 I
MTR_3g077650 Medicago truncatula MTR_3g077650 I
LPERR06G03780 Leersia perrieri LPERR06G03780 I
GSMUA_Achr6G06490_001 Musa acuminata GSMUA_Achr6G06490_001 I
GSMUA_Achr3G19490_001 Musa acuminata GSMUA_Achr3G19490_001 I
GRMZM5G870592 Zea mays GRMZM5G870592 I
GLYMA06G19280 Glycine max GLYMA06G19280 I
GLYMA05G02300 Glycine max GLYMA05G02300 I
OB06G13860 Oryza brachyantha OB06G13860 I
Bra033027 Brassica rapa Bra033027 I
Bra020992 Brassica rapa Bra020992 I
Bra013346 Brassica rapa Bra013346 I
Bo3g157300 Brassica oleracea Bo3g157300 I
Bo2g144970 Brassica oleracea Bo2g144970 I
Bo1g019910 Brassica oleracea Bo1g019910 I
BGIOSGA036541 Oryza indica BGIOSGA036541 I
BGIOSGA022369 Oryza indica BGIOSGA022369 I
ONIVA06G05390 Oryza nivara ONIVA06G05390 I
OS06G0162700 Oryza sativa OS06G0162700 I
ORUFI06G04170 Oryza rufipogon ORUFI06G04170 I
ORGLA12G0042300 Oryza glaberrima ORGLA12G0042300 I
ORGLA06G0038500 Oryza glaberrima ORGLA06G0038500 I
OPUNC12G04510 Oryza punctata OPUNC12G04510 I
OPUNC06G03990 Oryza punctata OPUNC06G03990 I
ONIVA12G04220 Oryza nivara ONIVA12G04220 I
OBART06G04170 Oryza barthii OBART06G04170 I
OMERI12G02760 Oryza meridionalis OMERI12G02760 I
OMERI06G04840 Oryza meridionalis OMERI06G04840 I
OLONG_010000 Oryza longistaminata OLONG_010000 I
OLONG_008158 Oryza longistaminata OLONG_008158 I
OGLUM12G05330 Oryza glumaepatula OGLUM12G05330 I
OGLUM06G04280 Oryza glumaepatula OGLUM06G04280 I
OBART12G04500 Oryza barthii OBART12G04500 I
OBART12G04480 Oryza barthii OBART12G04480 I
Lus10013084.g Linum usitatissimum Lus10013084.g N
Solyc09g055650.1 Solanum lycopersicum Solyc09g055650.1 N