CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf012088m
(
Mimulus guttatus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
mgf012088m
T048758_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BHLH34
M01704_2.00
Arabidopsis thaliana
VCACGYGH
DCRCGTGB
PBM
Weirauch et al.(2014)
pTH7212
0.844
0.725
BHLH34
M06734_2.00
Arabidopsis thaliana
NNNHNNDNNNNVCACGTGHCN
NGDCACGTGBNNNNHNNDNNN
Dap-seq
OMalley et al.(2016)
bHLH34_colamp_a
0.844
0.725
BHLH34
M06735_2.00
Arabidopsis thaliana
RWRNNNNNCACGTGBNNNNNNNN
NNNNNNNNVCACGTGNNNNNYWY
Dap-seq
OMalley et al.(2016)
bHLH34_col
0.844
0.725
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf012088m
bHLH
78
128
SNTKACREKQRRDRLNDKFMELGAILEPGRPPKTDKSAILSDALRMVTQLR
Links
Other
bHLH
family TFs
Other
Mimulus guttatus
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
grh
Drosophila melanogaster
FBgn0259211
D
TC004589
Tribolium castaneum
TC004589
I
MDOA000476
Musca domestica
MDOA000476
I
LLOJ002492
Lutzomyia longipalpis
LLOJ002492
I
ASTEI02169
Anopheles stephensi
ASTEI02169
I
AMIN010880
Anopheles minimus
AMIN010880
I
AMEC008183
Anopheles melas
AMEC008183
I
AFAF000103
Anopheles farauti
AFAF000103
I
AEPI006364
Anopheles epiroticus
AEPI006364
I
ACOM038990
Anopheles coluzzii
ACOM038990
I
AATE012841
Anopheles atroparvus
AATE012841
I
LDEC013994
Leptinotarsa decemlineata
LDEC013994
I
LCUP010301
Lucilia cuprina
LCUP010301
I
Hsal_11404--XP_394553.3_APIME
Harpegnathos saltator
Hsal_11404--XP_394553.3_APIME
I
Cflo_10585--XP_394553.3_APIME
Camponotus floridanus
Cflo_10585--XP_394553.3_APIME
I
YQE_09165
Dendroctonus ponderosae
YQE_09165
I
AAEL000577
Aedes aegypti
AAEL000577
I
RPRC012881
Rhodnius prolixus
RPRC012881
I
NV11321
Nasonia vitripennis
NV11321
I
MCINX002723
Melitaea cinxia
MCINX002723
I
KGM_04625
Danaus plexippus
KGM_04625
I
ISCW008081
Ixodes scapularis
ISCW008081
I
GA30279
Drosophila pseudoobscura
FBgn0263821
I
GK22232
Drosophila willistoni
FBgn0224217
I
GD11322
Drosophila simulans
FBgn0183071
I
GM21828
Drosophila sechellia
FBgn0176705
I
GL17227
Drosophila persimilis
FBgn0154830
I
GH22029
Drosophila grimshawi
FBgn0129490
I
GG21828
Drosophila erecta
FBgn0114006
I
grh
Drosophila yakuba
FBgn0067967
I
DAPPUDRAFT_64332
Daphnia pulex
DAPPUDRAFT_64332
I
ACUA023017
Anopheles culicifacies
ACUA023017
N