Sakowv30031408m.g (Saccoglossus kowalevskii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Sakowv30031408m.g T048924_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf21
M01746_2.00 		Mus musculus
RMCAKMTGK
MCAKMTGKY		 PBM
Weirauch et al.(2014)
pTH5087 		0.851 0.904
Tcf21
M02819_2.00 		Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB		 SELEX
Jolma et al.(2013)
Tcf21_1 		0.851 0.904
TCF21
M04092_2.00 		Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1 		0.851 0.904
TCF21
M04093_2.00 		Homo sapiens
NRCCATATGKYV
BRMCATATGGYN		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2 		0.851 0.904
TCF21
M04094_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1 		0.851 0.904
TCF21
M04095_2.00 		Homo sapiens
BACCATATGKYV
BRMCATATGGTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2 		0.851 0.904
Msc
M01730_2.00 		Mus musculus
NVCRKMYGBN
NVCRKMYGBN		 PBM
Weirauch et al.(2014)
pTH5112 		0.851 0.885
MSC
M02801_2.00 		Homo sapiens
AACAGCTGTT
AACAGCTGTT		 SELEX
Jolma et al.(2013)
MSC_1 		0.851 0.885
MSC
M04183_2.00 		Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1 		0.851 0.885
MSC
M04184_2.00 		Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2 		0.851 0.885
MSC
M04187_2.00 		Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1 		0.851 0.885
MSC
M04188_2.00 		Homo sapiens
BRMCATATGKYN
NRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2 		0.851 0.885
MSC
M04185_2.00 		Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1 		0.851 0.885
MSC
M04186_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2 		0.851 0.885
MSC
M04189_2.00 		Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1 		0.851 0.885
MSC
M04190_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2 		0.851 0.885
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23939531_peptide bHLH 45 97

Links

Other bHLH family TFs
Other Saccoglossus kowalevskii TFs

178 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PV11_00858 Exophiala sideris PV11_00858 N
MGYG_03712 Microsporum gypseum MGYG_03712 N
PCH_Pc21g17490 Penicillium rubens PCH_Pc21g17490 N
PDE_09355 Penicillium oxalicum PDE_09355 N
PMAA_036960 Talaromyces marneffei PMAA_036960 N
PV04_03557 Capronia semiimmersa PV04_03557 N
PV04_03941 Capronia semiimmersa PV04_03941 N
PV05_05879 Exophiala xenobiotica PV05_05879 N
PV05_07172 Exophiala xenobiotica PV05_07172 N
PV06_00153 Exophiala oligosperma PV06_00153 N
PV07_04661 Cladophialophora immunda PV07_04661 N
PV07_06727 Cladophialophora immunda PV07_06727 N
PV08_09743 Exophiala spinifera PV08_09743 N
PV10_05359 Exophiala mesophila PV10_05359 N
MCYG_06896 Arthroderma otae MCYG_06896 N
PV11_02684 Exophiala sideris PV11_02684 N
PVAR5_7243 Byssochlamys spectabilis PVAR5_7243 N
SETTUDRAFT_27878 Setosphaeria turcica SETTUDRAFT_27878 N
TSTA_055160 Talaromyces stipitatus TSTA_055160 N
Z517_05815 Fonsecaea pedrosoi Z517_05815 N
Z517_10400 Fonsecaea pedrosoi Z517_10400 N
Z518_01292 Rhinocladiella mackenziei Z518_01292 N
Z518_11251 Rhinocladiella mackenziei Z518_11251 N
Z519_02290 Cladophialophora bantiana Z519_02290 N
Z519_06883 Cladophialophora bantiana Z519_06883 N
estExt_Genewise1Plus.C_150467 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_150467 N
Pc21g17490 Penicillium chrysogenum Pc21g17490 N
PMAA_036960 Penicillium marneffei PMAA_036960 N
ATEG_09390 Aspergillus terreus CADATEAG00008360 N
MCYG_06896 Microsporum canis MCYG_06896 N
SNOG_05707 Stagonospora nodorum SNOG_05707 N
A1O1_08721 Capronia coronata A1O1_08721 N
A1O3_08106 Capronia epimyces A1O3_08106 N
A1O5_04458 Cladophialophora psammophila A1O5_04458 N
A1O5_11083 Cladophialophora psammophila A1O5_11083 N
A1O7_03367 Cladophialophora yegresii A1O7_03367 N
A1O9_03441 Exophiala aquamarina A1O9_03441 N
A1O9_12648 Exophiala aquamarina A1O9_12648 N
BDDG_09052 Blastomyces dermatitidis BDDG_09052 N
AFUA_5G06410 Aspergillus fumigatus CADAFUAG00006238 N
CADANGAG00013526 Aspergillus niger CADANGAG00013526 N
ANIA_02270 Aspergillus nidulans CADANIAG00008962 N
CIMG_06012 Coccidioides immitis CIMG_06012 N
NFIA_036720 Neosartorya fischeri CADNFIAG00003562 N
CPC735_025940 Coccidioides posadasii CPC735_025940 N
EPUS_04193 Endocarpon pusillum EPUS_04193 N
EURHEDRAFT_414224 Aspergillus ruber EURHEDRAFT_414224 N
G647_03415 Cladophialophora carrionii G647_03415 N
G647_05017 Cladophialophora carrionii G647_05017 N
H101_07203 Trichophyton interdigitale H101_07203 N
H102_04274 Trichophyton rubrum H102_04274 N
H105_04299 Trichophyton soudanense H105_04299 N
HMPREF1120_04992 Exophiala dermatitidis HMPREF1120_04992 N
HMPREF1120_09222 Exophiala dermatitidis HMPREF1120_09222 N
HMPREF1541_04963 Cyphellophora europaea HMPREF1541_04963 N
HMPREF1541_06758 Cyphellophora europaea HMPREF1541_06758 N