CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.2236s0005
(
Capsella grandiflora
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Cagra.2236s0005
T049279_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.2236s0005.1.p
bHLH
47
95
CSRKAEREKLRRDKLKEQFLELGNALDPNRPKSDKVSILTDTIQMLKDV
Links
Other
bHLH
family TFs
Other
Capsella grandiflora
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
bHLH11
Arabidopsis thaliana
AT4G36060
N
0.856
bHLH11
Arabidopsis lyrata
fgenesh2_kg.7__460__AT4G36060.2
N
0.861
Bostr.7867s1468
Boechera stricta
Bostr.7867s1468
N
0.901
Carubv10006934m.g
Capsella rubella
Carubv10006934m.g
N
0.914