CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.5905s0007
(
Capsella grandiflora
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Cagra.5905s0007
T049311_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.5905s0007.1.p
bHLH
8
62
RQSSSTAPRISDDQMIDLVTKLRQILPEIGQRRRSDKVSASKVLQETCNYIRNLN
Links
Other
bHLH
family TFs
Other
Capsella grandiflora
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_00317
Capronia coronata
A1O1_00317
N
A1O3_02293
Capronia epimyces
A1O3_02293
N
A1O5_03985
Cladophialophora psammophila
A1O5_03985
N
A1O7_00193
Cladophialophora yegresii
A1O7_00193
N
HMPREF1120_06167
Exophiala dermatitidis
HMPREF1120_06167
N
PFICI_07364
Pestalotiopsis fici
PFICI_07364
N
PV04_01911
Capronia semiimmersa
PV04_01911
N
PV05_11348
Exophiala xenobiotica
PV05_11348
N
PV06_03462
Exophiala oligosperma
PV06_03462
N
PV07_10478
Cladophialophora immunda
PV07_10478
N
PV08_05826
Exophiala spinifera
PV08_05826
N
PV10_06455
Exophiala mesophila
PV10_06455
N
PV11_07762
Exophiala sideris
PV11_07762
N
Z517_08672
Fonsecaea pedrosoi
Z517_08672
N
Z518_03766
Rhinocladiella mackenziei
Z518_03766
N
Z519_03283
Cladophialophora bantiana
Z519_03283
N