Carubv10001470m.g (Capsella rubella)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Carubv10001470m.g T049327_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10001470m bHLH 118 169

Links

Other bHLH family TFs
Other Capsella rubella TFs

183 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ERF14 Arabidopsis thaliana AT1G04370 D
ERF13 Arabidopsis thaliana AT2G44840 D
ERF098 Arabidopsis thaliana AT3G23230 D
ERF1B Arabidopsis thaliana AT3G23240 D
ERF1A Arabidopsis thaliana AT4G17500 D
ERF2 Arabidopsis thaliana AT5G47220 D
BGIOSGA014605 Oryza indica BGIOSGA014605 I
Bo1g017590 Brassica oleracea Bo1g017590 I
Bo1g102210 Brassica oleracea Bo1g102210 I
Bo1g102220 Brassica oleracea Bo1g102220 I
Bo2g132270 Brassica oleracea Bo2g132270 I
Bo4g024140 Brassica oleracea Bo4g024140 I
Bo4g195220 Brassica oleracea Bo4g195220 I
Bo5g004520 Brassica oleracea Bo5g004520 I
Bo7g040810 Brassica oleracea Bo7g040810 I
Bo7g077390 Brassica oleracea Bo7g077390 I
Bo8g049470 Brassica oleracea Bo8g049470 I
Bo8g115580 Brassica oleracea Bo8g115580 I
Bo8g118250 Brassica oleracea Bo8g118250 I
Bo9g001020 Brassica oleracea Bo9g001020 I
Bo9g069400 Brassica oleracea Bo9g069400 I
Bra004873 Brassica rapa Bra004873 I
Bra014925 Brassica rapa Bra014925 I
Bra015310 Brassica rapa Bra015310 I
Bra017495 Brassica rapa Bra017495 I
Bra021047 Brassica rapa Bra021047 I
Bra021048 Brassica rapa Bra021048 I
Bra022115 Brassica rapa Bra022115 I
Bra023745 Brassica rapa Bra023745 I
Bra023746 Brassica rapa Bra023746 I
Bra023748 Brassica rapa Bra023748 I
Bra032512 Brassica rapa Bra032512 I
Bra032665 Brassica rapa Bra032665 I
Bra037630 Brassica rapa Bra037630 I
Bra040159 Brassica rapa Bra040159 I
BRADI3G50490 Brachypodium distachyon BRADI3G50490 I
fgenesh2_kg.3__2538__AT3G23230.1 Arabidopsis lyrata fgenesh2_kg.3__2538__AT3G23230.1 I
fgenesh2_kg.471__1__AT3G23230.1 Arabidopsis lyrata fgenesh2_kg.471__1__AT3G23230.1 I
ATERF-1 Arabidopsis lyrata fgenesh2_kg.7__2559__AT4G17500.1 I
GLYMA01G41520 Glycine max GLYMA01G41520 I
GLYMA03G26310 Glycine max GLYMA03G26310 I
GLYMA03G26437 Glycine max GLYMA03G26437 I
GLYMA03G26520 Glycine max GLYMA03G26520 I
GLYMA03G26530 Glycine max GLYMA03G26530 I
GLYMA05G05180 Glycine max GLYMA05G05180 I
GLYMA07G14070 Glycine max GLYMA07G14070 I
GLYMA11G03910 Glycine max GLYMA11G03910 I
GLYMA17G15480 Glycine max GLYMA17G15480 I
GLYMA18G48741 Glycine max GLYMA18G48741 I
GRMZM2G055180 Zea mays GRMZM2G055180 I
GRMZM2G080516 Zea mays GRMZM2G080516 I
GRMZM2G466044 Zea mays GRMZM2G466044 I
GSMUA_Achr11G20930_001 Musa acuminata GSMUA_Achr11G20930_001 I
GSMUA_Achr1G00490_001 Musa acuminata GSMUA_Achr1G00490_001 I
GSMUA_Achr5G12530_001 Musa acuminata GSMUA_Achr5G12530_001 I
GSMUA_Achr5G21050_001 Musa acuminata GSMUA_Achr5G21050_001 I
LPERR04G16740 Leersia perrieri LPERR04G16740 I
MTR_1g070000 Medicago truncatula MTR_1g070000 I
MTR_1g070015 Medicago truncatula MTR_1g070015 I
MTR_1g070020 Medicago truncatula MTR_1g070020 I
MTR_1g070045 Medicago truncatula MTR_1g070045 I
MTR_4g088005 Medicago truncatula MTR_4g088005 I
MTR_4g100380 Medicago truncatula MTR_4g100380 I
MTR_7g081795 Medicago truncatula MTR_7g081795 I
MTR_7g081805 Medicago truncatula MTR_7g081805 I
MTR_7g081815 Medicago truncatula MTR_7g081815 I
MTR_8g006815 Medicago truncatula MTR_8g006815 I
MTR_8g006825 Medicago truncatula MTR_8g006825 I
MTR_8g006840 Medicago truncatula MTR_8g006840 I
OGLUM04G20600 Oryza glumaepatula OGLUM04G20600 I
OMERI04G17100 Oryza meridionalis OMERI04G17100 I
ONIVA04G18900 Oryza nivara ONIVA04G18900 I
OPUNC04G18300 Oryza punctata OPUNC04G18300 I
ORGLA04G0177100 Oryza glaberrima ORGLA04G0177100 I
ORUFI04G22230 Oryza rufipogon ORUFI04G22230 I
OS04G0546800 Oryza sativa OS04G0546800 I
PGSC0003DMG400002272 Solanum tuberosum PGSC0003DMG400002272 I
PGSC0003DMG400007027 Solanum tuberosum PGSC0003DMG400007027 I
PGSC0003DMG400010309 Solanum tuberosum PGSC0003DMG400010309 I
PGSC0003DMG400010724 Solanum tuberosum PGSC0003DMG400010724 I
PGSC0003DMG400013402 Solanum tuberosum PGSC0003DMG400013402 I
PGSC0003DMG400014204 Solanum tuberosum PGSC0003DMG400014204 I
PGSC0003DMG400017231 Solanum tuberosum PGSC0003DMG400017231 I
PGSC0003DMG400026046 Solanum tuberosum PGSC0003DMG400026046 I
PGSC0003DMG400026049 Solanum tuberosum PGSC0003DMG400026049 I
PGSC0003DMG400026260 Solanum tuberosum PGSC0003DMG400026260 I
PGSC0003DMG400040573 Solanum tuberosum PGSC0003DMG400040573 I
PGSC0003DMG400041045 Solanum tuberosum PGSC0003DMG400041045 I
POPTR_0001s15390 Populus trichocarpa POPTR_0001s15390 I
POPTR_0003s07910 Populus trichocarpa POPTR_0003s07910 I
POPTR_0003s15060 Populus trichocarpa POPTR_0003s15060 I
POPTR_0014s04600 Populus trichocarpa POPTR_0014s04600 I
POPTR_0014s04610 Populus trichocarpa POPTR_0014s04610 I
POPTR_0014s04620 Populus trichocarpa POPTR_0014s04620 I
POPTR_0014s04630 Populus trichocarpa POPTR_0014s04630 I
POPTR_0014s04640 Populus trichocarpa POPTR_0014s04640 I
PRUPE_ppa009707mg Prunus persica PRUPE_ppa009707mg I
PRUPE_ppa016903mg Prunus persica PRUPE_ppa016903mg I
PRUPE_ppa020417mg Prunus persica PRUPE_ppa020417mg I
PRUPE_ppa020642mg Prunus persica PRUPE_ppa020642mg I
PRUPE_ppa023698mg Prunus persica PRUPE_ppa023698mg I
PRUPE_ppa025748mg Prunus persica PRUPE_ppa025748mg I
PRUPE_ppb014367mg Prunus persica PRUPE_ppb014367mg I
Sb04g033105 Sorghum bicolor Sb04g033105 I
Sb06g024355 Sorghum bicolor Sb06g024355 I
ATERF14 Arabidopsis lyrata scaffold_100393.1 I
ERF1 Arabidopsis lyrata scaffold_302806.1 I
ATERF13 Arabidopsis lyrata scaffold_403422.1 I
scaffold_604310.1 Arabidopsis lyrata scaffold_604310.1 I
Si017941m.g Setaria italica Si017941m.g I
Si030692m.g Setaria italica Si030692m.g I
Solyc01g090310.2 Solanum lycopersicum Solyc01g090310.2 I
Solyc01g090370.1 Solanum lycopersicum Solyc01g090370.1 I
Solyc02g077370.1 Solanum lycopersicum Solyc02g077370.1 I
Solyc03g005520.1 Solanum lycopersicum Solyc03g005520.1 I
Solyc05g050790.1 Solanum lycopersicum Solyc05g050790.1 I
Solyc08g007230.1 Solanum lycopersicum Solyc08g007230.1 I
Solyc08g078170.1 Solanum lycopersicum Solyc08g078170.1 I
Solyc09g066350.1 Solanum lycopersicum Solyc09g066350.1 I
Solyc09g089930.1 Solanum lycopersicum Solyc09g089930.1 I
TCM_005704 Theobroma cacao TCM_005704 I
TCM_005705 Theobroma cacao TCM_005705 I
TCM_005706 Theobroma cacao TCM_005706 I
TCM_005707 Theobroma cacao TCM_005707 I
TCM_014850 Theobroma cacao TCM_014850 I
TCM_015898 Theobroma cacao TCM_015898 I
Traes_2AL_158F8EE88 Triticum aestivum Traes_2AL_158F8EE88 I
Traes_2BL_CF47A74CC Triticum aestivum Traes_2BL_CF47A74CC I
TRAES3BF046300130CFD_g Triticum aestivum TRAES3BF046300130CFD_g I
VIT_02s0234g00130 Vitis vinifera VIT_02s0234g00130 I
VIT_07s0005g03280 Vitis vinifera VIT_07s0005g03280 I
VIT_10s0003g00580 Vitis vinifera VIT_10s0003g00580 I
VIT_15s0021g01590 Vitis vinifera VIT_15s0021g01590 I
VIT_15s0021g01600 Vitis vinifera VIT_15s0021g01600 I
VIT_15s0021g01610 Vitis vinifera VIT_15s0021g01610 I
VIT_15s0021g01630 Vitis vinifera VIT_15s0021g01630 I
Ca_02325 Cicer arietinum Ca_02325 I
Ca_06032 Cicer arietinum Ca_06032 I
Ca_06034 Cicer arietinum Ca_06034 I
Ca_12775 Cicer arietinum Ca_12775 I
Ca_17211 Cicer arietinum Ca_17211 I
Ca_17212 Cicer arietinum Ca_17212 I
Cla003706 Citrullus lanatus Cla003706 I
Cla005705 Citrullus lanatus Cla005705 I
Cla010886 Citrullus lanatus Cla010886 I
Cla021383 Citrullus lanatus Cla021383 I
Cla021384 Citrullus lanatus Cla021384 I
Cla021851 Citrullus lanatus Cla021851 I
Pm017696 Prunus mume Pm017696 I
Pm017697 Prunus mume Pm017697 I
Pm017698 Prunus mume Pm017698 I
Pm017699 Prunus mume Pm017699 I
Pm017700 Prunus mume Pm017700 I
Pm020605 Prunus mume Pm020605 I
Pm023376 Prunus mume Pm023376 I
28192.m000255 Ricinus communis 28192.m000255 I
29900.m001559 Ricinus communis 29900.m001559 I
30174.m008755 Ricinus communis 30174.m008755 I
30174.m008756 Ricinus communis 30174.m008756 I
30174.m008759 Ricinus communis 30174.m008759 I
cassava19881.m1 Manihot esculenta cassava19881.m1 I
cassava19882.m1 Manihot esculenta cassava19882.m1 I
cassava19883.m1 Manihot esculenta cassava19883.m1 I
cassava43266.valid.m1 Manihot esculenta cassava43266.valid.m1 I
cassava4871.m1 Manihot esculenta cassava4871.m1 I
Cucsa.129630 Cucumis sativus Cucsa.129630 I
Cucsa.255330 Cucumis sativus Cucsa.255330 I
Cucsa.260030 Cucumis sativus Cucsa.260030 I
Cucsa.260040 Cucumis sativus Cucsa.260040 I
Cucsa.321160 Cucumis sativus Cucsa.321160 I
e_gw1.53.114.1 Physcomitrella patens e_gw1.53.114.1 I
e_gw1.72.116.1 Physcomitrella patens e_gw1.72.116.1 I
mgf019541m Mimulus guttatus mgf019541m I
mgf021067m Mimulus guttatus mgf021067m I
mgf021756m Mimulus guttatus mgf021756m I
mgf021973m Mimulus guttatus mgf021973m I
mgf025885m Mimulus guttatus mgf025885m I
mgf026487m Mimulus guttatus mgf026487m I
Aquca_067_00004 Aquilegia coerulea Aquca_067_00004 I
Bostr.14419s0016 Boechera stricta Bostr.14419s0016 I
Bostr.14547s0008 Boechera stricta Bostr.14547s0008 I
Bostr.19424s0319 Boechera stricta Bostr.19424s0319 I
Bostr.19424s0320 Boechera stricta Bostr.19424s0320 I
Bostr.25993s0288 Boechera stricta Bostr.25993s0288 I
Bostr.26675s0318 Boechera stricta Bostr.26675s0318 I
Bostr.30275s0207 Boechera stricta Bostr.30275s0207 I
Cagra.0239s0035 Capsella grandiflora Cagra.0239s0035 I
Cagra.1671s0052 Capsella grandiflora Cagra.1671s0052 I
Cagra.3356s0041 Capsella grandiflora Cagra.3356s0041 I
Cagra.3675s0007 Capsella grandiflora Cagra.3675s0007 I
Cagra.4714s0001 Capsella grandiflora Cagra.4714s0001 I
Cagra.8559s0001 Capsella grandiflora Cagra.8559s0001 I
Cagra.8559s0002 Capsella grandiflora Cagra.8559s0002 I
Carubv10005497m.g Capsella rubella Carubv10005497m.g I
Carubv10005868m.g Capsella rubella Carubv10005868m.g I
Carubv10011057m.g Capsella rubella Carubv10011057m.g I
Carubv10014553m.g Capsella rubella Carubv10014553m.g I
Carubv10015406m.g Capsella rubella Carubv10015406m.g I
Carubv10023967m.g Capsella rubella Carubv10023967m.g I
Carubv10027108m.g Capsella rubella Carubv10027108m.g I
Ciclev10005863m.g Citrus clementina Ciclev10005863m.g I
Ciclev10021652m.g Citrus clementina Ciclev10021652m.g I
Eucgr.A01091 Eucalyptus grandis Eucgr.A01091 I
Eucgr.B01541 Eucalyptus grandis Eucgr.B01541 I
Eucgr.E01561 Eucalyptus grandis Eucgr.E01561 I
Eucgr.E01571 Eucalyptus grandis Eucgr.E01571 I
Eucgr.E02651 Eucalyptus grandis Eucgr.E02651 I
Eucgr.E03168 Eucalyptus grandis Eucgr.E03168 I
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I
Eucgr.G00388 Eucalyptus grandis Eucgr.G00388 I
Eucgr.G00390 Eucalyptus grandis Eucgr.G00390 I
Eucgr.G00391 Eucalyptus grandis Eucgr.G00391 I
Eucgr.G00392 Eucalyptus grandis Eucgr.G00392 I
Eucgr.G00393 Eucalyptus grandis Eucgr.G00393 I
Eucgr.G00394 Eucalyptus grandis Eucgr.G00394 I
Eucgr.G00396 Eucalyptus grandis Eucgr.G00396 I
Eucgr.G00397 Eucalyptus grandis Eucgr.G00397 I
Eucgr.G00943 Eucalyptus grandis Eucgr.G00943 I
evm.TU.supercontig_101.15 Carica papaya evm.TU.supercontig_101.15 I
evm.TU.supercontig_44.73 Carica papaya evm.TU.supercontig_44.73 I
gene04913-v1.0-hybrid Fragaria vesca gene04913-v1.0-hybrid I
gene04916-v1.0-hybrid Fragaria vesca gene04916-v1.0-hybrid I
gene04917-v1.0-hybrid Fragaria vesca gene04917-v1.0-hybrid I
gene08075-v1.0-hybrid Fragaria vesca gene08075-v1.0-hybrid I
gene10841-v1.0-hybrid Fragaria vesca gene10841-v1.0-hybrid I
gene21165-v1.0-hybrid Fragaria vesca gene21165-v1.0-hybrid I
Gorai.001G252400 Gossypium raimondii Gorai.001G252400 I
Gorai.004G070500 Gossypium raimondii Gorai.004G070500 I
Gorai.004G070600 Gossypium raimondii Gorai.004G070600 I
Gorai.004G070800 Gossypium raimondii Gorai.004G070800 I
Gorai.004G165800 Gossypium raimondii Gorai.004G165800 I
Gorai.004G195000 Gossypium raimondii Gorai.004G195000 I
Gorai.004G195100 Gossypium raimondii Gorai.004G195100 I
Gorai.004G195200 Gossypium raimondii Gorai.004G195200 I
Gorai.006G214100 Gossypium raimondii Gorai.006G214100 I
Gorai.007G086000 Gossypium raimondii Gorai.007G086000 I
Gorai.007G086100 Gossypium raimondii Gorai.007G086100 I
Gorai.008G108400 Gossypium raimondii Gorai.008G108400 I
Gorai.008G108500 Gossypium raimondii Gorai.008G108500 I
Gorai.008G108600 Gossypium raimondii Gorai.008G108600 I
Gorai.008G232500 Gossypium raimondii Gorai.008G232500 I
Lus10004011.g Linum usitatissimum Lus10004011.g I
Lus10004368.g Linum usitatissimum Lus10004368.g I
Lus10004369.g Linum usitatissimum Lus10004369.g I
Lus10013959.g Linum usitatissimum Lus10013959.g I
Lus10016209.g Linum usitatissimum Lus10016209.g I
Lus10016210.g Linum usitatissimum Lus10016210.g I
Lus10016211.g Linum usitatissimum Lus10016211.g I
Lus10016212.g Linum usitatissimum Lus10016212.g I
Lus10016223.g Linum usitatissimum Lus10016223.g I
Lus10016224.g Linum usitatissimum Lus10016224.g I
Lus10016225.g Linum usitatissimum Lus10016225.g I
Lus10016227.g Linum usitatissimum Lus10016227.g I
Lus10025430.g Linum usitatissimum Lus10025430.g I
Lus10029314.g Linum usitatissimum Lus10029314.g I
Lus10029318.g Linum usitatissimum Lus10029318.g I
Lus10029319.g Linum usitatissimum Lus10029319.g I
Lus10029331.g Linum usitatissimum Lus10029331.g I
Lus10029334.g Linum usitatissimum Lus10029334.g I
Lus10030261.g Linum usitatissimum Lus10030261.g I
Lus10040167.g Linum usitatissimum Lus10040167.g I
MDP0000122665 Malus domestica MDP0000122665 I
MDP0000133485 Malus domestica MDP0000133485 I
MDP0000135205 Malus domestica MDP0000135205 I
MDP0000178398 Malus domestica MDP0000178398 I
MDP0000180950 Malus domestica MDP0000180950 I
MDP0000189033 Malus domestica MDP0000189033 I
MDP0000299277 Malus domestica MDP0000299277 I
MDP0000665685 Malus domestica MDP0000665685 I
MDP0000787281 Malus domestica MDP0000787281 I
MDP0000907929 Malus domestica MDP0000907929 I
orange1.1g030002m.g Citrus sinensis orange1.1g030002m.g I
orange1.1g044584m.g Citrus sinensis orange1.1g044584m.g I
orange1.1g044938m.g Citrus sinensis orange1.1g044938m.g I
Pavir.Aa01184 Panicum virgatum Pavir.Aa01184 I
Pavir.Ab02556 Panicum virgatum Pavir.Ab02556 I
Pavir.Ga01099 Panicum virgatum Pavir.Ga01099 I
Pavir.Gb00956 Panicum virgatum Pavir.Gb00956 I
SapurV1A.0007s0970 Salix purpurea SapurV1A.0007s0970 I
SapurV1A.0107s0450 Salix purpurea SapurV1A.0107s0450 I
SapurV1A.0124s0170 Salix purpurea SapurV1A.0124s0170 I
SapurV1A.0124s0180 Salix purpurea SapurV1A.0124s0180 I
SapurV1A.0886s0020 Salix purpurea SapurV1A.0886s0020 I
SapurV1A.1153s0050 Salix purpurea SapurV1A.1153s0050 I
Thhalv10001003m.g Eutrema salsugineum Thhalv10001003m.g I
Thhalv10001758m.g Eutrema salsugineum Thhalv10001758m.g I
Thhalv10009418m.g Eutrema salsugineum Thhalv10009418m.g I
Thhalv10022108m.g Eutrema salsugineum Thhalv10022108m.g I
Thhalv10022374m.g Eutrema salsugineum Thhalv10022374m.g I
Thhalv10027401m.g Eutrema salsugineum Thhalv10027401m.g I
Thhalv10029212m.g Eutrema salsugineum Thhalv10029212m.g I
PK29475.1 Cannabis sativa PK29475.1 I
chr3.CM0080.200.nd Lotus japonicus chr3.CM0080.200.nd I
chr3.CM0080.270.nc Lotus japonicus chr3.CM0080.270.nc I
chr5.CM0494.320.nc Lotus japonicus chr5.CM0494.320.nc I
LjSGA_146586.1 Lotus japonicus LjSGA_146586.1 I