Carubv10007380m.g (Capsella rubella)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Carubv10007380m.g T049357_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DYT1
M02654_2.00 		Arabidopsis thaliana
TCACGTGWYTBRYK
MRYVARWCACGTGA		 SELEX
Mathelier et al.(2014)
MA0580.1 		0.870 0.939
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10007380m bHLH 31 79

Links

Other bHLH family TFs
Other Capsella rubella TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M1BP Drosophila melanogaster FBgn0037621 N
GA22043 Drosophila pseudoobscura FBgn0082027 N
GF16841 Drosophila ananassae FBgn0093862 N
GG17429 Drosophila erecta FBgn0109655 N
GH19016 Drosophila grimshawi FBgn0126483 N
GI10369 Drosophila mojavensis FBgn0133133 N
GL12135 Drosophila persimilis FBgn0149743 N
GM26321 Drosophila sechellia FBgn0181175 N
GJ24585 Drosophila virilis FBgn0211664 N
GK11271 Drosophila willistoni FBgn0213282 N