Ciclev10016381m.g (Citrus clementina)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Ciclev10016381m.g T049506_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10016381m bHLH 76 126
Ciclev10016508m bHLH 76 126
Ciclev10016893m bHLH 76 126

Links

Other bHLH family TFs
Other Citrus clementina TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RVE8 Arabidopsis thaliana AT3G09600 D
RVE5 Arabidopsis thaliana AT4G01280 D
RVE4 Arabidopsis thaliana AT5G02840 D
RVE1 Arabidopsis thaliana AT5G17300 D
RVE6 Arabidopsis thaliana AT5G52660 D
mybG Dictyostelium discoideum DDB_G0288783 D
PK02532.1 Cannabis sativa PK02532.1 D
PK08316.1 Cannabis sativa PK08316.1 D
Al_scaffold_0006_3886 Arabidopsis lyrata Al_scaffold_0006_3886 I
Al_scaffold_0008_1647 Arabidopsis lyrata Al_scaffold_0008_1647 I
AMTR_s00001p00261430 Amborella trichopoda AMTR_s00001p00261430 I
AMTR_s00001p00272270 Amborella trichopoda AMTR_s00001p00272270 I
AMTR_s00023p00237480 Amborella trichopoda AMTR_s00023p00237480 I
AMTR_s00044p00072910 Amborella trichopoda AMTR_s00044p00072910 I
AT1G01520 Arabidopsis thaliana AT1G01520 I
RVE2 Arabidopsis thaliana AT5G37260 I
BGIOSGA005842 Oryza indica BGIOSGA005842 I
BGIOSGA018757 Oryza indica BGIOSGA018757 I
BGIOSGA020501 Oryza indica BGIOSGA020501 I
BGIOSGA020708 Oryza indica BGIOSGA020708 I
Bo1g144410 Brassica oleracea Bo1g144410 I
Bo3g002070 Brassica oleracea Bo3g002070 I
Bo3g023120 Brassica oleracea Bo3g023120 I
Bo5g002430 Brassica oleracea Bo5g002430 I
Bo5g002760 Brassica oleracea Bo5g002760 I
Bo5g138190 Brassica oleracea Bo5g138190 I
Bo6g057640 Brassica oleracea Bo6g057640 I
Bo9g003580 Brassica oleracea Bo9g003580 I
Bo9g183320 Brassica oleracea Bo9g183320 I
Bra003117 Brassica rapa Bra003117 I
Bra005751 Brassica rapa Bra005751 I
Bra009562 Brassica rapa Bra009562 I
Bra029111 Brassica rapa Bra029111 I
Bra029778 Brassica rapa Bra029778 I
Bra033257 Brassica rapa Bra033257 I
Bra033291 Brassica rapa Bra033291 I
Bra034074 Brassica rapa Bra034074 I
Bra037365 Brassica rapa Bra037365 I
Bra039503 Brassica rapa Bra039503 I
BRADI1G32330 Brachypodium distachyon BRADI1G32330 I
BRADI3G51757 Brachypodium distachyon BRADI3G51757 I
CMK043C Cyanidioschyzon merolae CMK043C I
estExt_fgenesh1_pg.C_190109 Bigelowiella natans estExt_fgenesh1_pg.C_190109 I
F775_09103 Aegilops tauschii F775_09103 I
F775_23690 Aegilops tauschii F775_23690 I
F775_30481 Aegilops tauschii F775_30481 I
AN Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000066 I
LCL1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6000163 I
fgenesh2_kg.3__982__AT3G09600.1 Arabidopsis lyrata fgenesh2_kg.3__982__AT3G09600.1 I
RVE1 Arabidopsis lyrata fgenesh2_kg.6__1729__AT5G17300.1 I
RVE2 Arabidopsis lyrata fgenesh2_kg.7__3122__AT5G37260.1 I
GLYMA03G33440 Glycine max GLYMA03G33440 I
GLYMA07G07200 Glycine max GLYMA07G07200 I
GLYMA09G24400 Glycine max GLYMA09G24400 I
GLYMA09G29800 Glycine max GLYMA09G29800 I
GLYMA09G39111 Glycine max GLYMA09G39111 I
GLYMA10G05560 Glycine max GLYMA10G05560 I
GLYMA10G37520 Glycine max GLYMA10G37520 I
GLYMA13G19910 Glycine max GLYMA13G19910 I
GLYMA16G03640 Glycine max GLYMA16G03640 I
GLYMA16G29740 Glycine max GLYMA16G29740 I
GLYMA16G34340 Glycine max GLYMA16G34340 I
GLYMA18G47230 Glycine max GLYMA18G47230 I
GLYMA19G36170 Glycine max GLYMA19G36170 I
GLYMA20G30250 Glycine max GLYMA20G30250 I
GRMZM2G057408 Zea mays GRMZM2G057408 I
GRMZM2G118693 Zea mays GRMZM2G118693 I
GRMZM2G135052 Zea mays GRMZM2G135052 I
GRMZM2G145041 Zea mays GRMZM2G145041 I
GRMZM2G170148 Zea mays GRMZM2G170148 I
GRMZM5G833032 Zea mays GRMZM5G833032 I
GSMUA_Achr11G01420_001 Musa acuminata GSMUA_Achr11G01420_001 I
GSMUA_Achr1G03720_001 Musa acuminata GSMUA_Achr1G03720_001 I
GSMUA_Achr1G06480_001 Musa acuminata GSMUA_Achr1G06480_001 I
GSMUA_Achr5G10280_001 Musa acuminata GSMUA_Achr5G10280_001 I
GSMUA_Achr7G04620_001 Musa acuminata GSMUA_Achr7G04620_001 I
GSMUA_Achr7G17560_001 Musa acuminata GSMUA_Achr7G17560_001 I
LPERR02G22740 Leersia perrieri LPERR02G22740 I
LPERR06G20160 Leersia perrieri LPERR06G20160 I
LPERR06G23620 Leersia perrieri LPERR06G23620 I
MLOC_5597 Hordeum vulgare MLOC_5597 I
MLOC_56804 Hordeum vulgare MLOC_56804 I
MLOC_68189 Hordeum vulgare MLOC_68189 I
MTR_0123s0070 Medicago truncatula MTR_0123s0070 I
MTR_1g067000 Medicago truncatula MTR_1g067000 I
MTR_3g064500 Medicago truncatula MTR_3g064500 I
MTR_6g477860 Medicago truncatula MTR_6g477860 I
MTR_8g028655 Medicago truncatula MTR_8g028655 I
OB02G35240 Oryza brachyantha OB02G35240 I
OB05G14050 Oryza brachyantha OB05G14050 I
OB06G10430 Oryza brachyantha OB06G10430 I
OB06G32000 Oryza brachyantha OB06G32000 I
OBART02G27940 Oryza barthii OBART02G27940 I
OBART05G04360 Oryza barthii OBART05G04360 I
OBART06G24250 Oryza barthii OBART06G24250 I
OBART06G28140 Oryza barthii OBART06G28140 I
OGLUM02G28500 Oryza glumaepatula OGLUM02G28500 I
OGLUM06G25500 Oryza glumaepatula OGLUM06G25500 I
OGLUM06G29530 Oryza glumaepatula OGLUM06G29530 I
OLONG_007470 Oryza longistaminata OLONG_007470 I
OMERI02G27110 Oryza meridionalis OMERI02G27110 I
OMERI06G24490 Oryza meridionalis OMERI06G24490 I
OMERI06G28070 Oryza meridionalis OMERI06G28070 I
ONIVA02G31050 Oryza nivara ONIVA02G31050 I
ONIVA05G04710 Oryza nivara ONIVA05G04710 I
ONIVA06G30670 Oryza nivara ONIVA06G30670 I
ONIVA06G31120 Oryza nivara ONIVA06G31120 I
OPUNC02G25660 Oryza punctata OPUNC02G25660 I
OPUNC06G21970 Oryza punctata OPUNC06G21970 I
OPUNC06G25680 Oryza punctata OPUNC06G25680 I
ORGLA02G0240100 Oryza glaberrima ORGLA02G0240100 I
ORGLA06G0003400 Oryza glaberrima ORGLA06G0003400 I
ORGLA06G0204000 Oryza glaberrima ORGLA06G0204000 I
ORGLA06G0287300 Oryza glaberrima ORGLA06G0287300 I
ORUFI02G29430 Oryza rufipogon ORUFI02G29430 I
ORUFI05G04560 Oryza rufipogon ORUFI05G04560 I
ORUFI06G26070 Oryza rufipogon ORUFI06G26070 I
ORUFI06G30080 Oryza rufipogon ORUFI06G30080 I
OS02G0680700 Oryza sativa OS02G0680700 I
OS05G0162800 Oryza sativa OS05G0162800 I
OS06G0105800 Oryza sativa OS06G0105800 I
OS06G0728700 Oryza sativa OS06G0728700 I
OSTLU_6612 Ostreococcus lucimarinus OSTLU_6612 I
OSTLU_9264 Ostreococcus lucimarinus OSTLU_9264 I
PGSC0003DMG400000189 Solanum tuberosum PGSC0003DMG400000189 I
PGSC0003DMG400011048 Solanum tuberosum PGSC0003DMG400011048 I
PGSC0003DMG400021459 Solanum tuberosum PGSC0003DMG400021459 I
PGSC0003DMG400025632 Solanum tuberosum PGSC0003DMG400025632 I
PGSC0003DMG400028896 Solanum tuberosum PGSC0003DMG400028896 I
POPTR_0002s16460 Populus trichocarpa POPTR_0002s16460 I
POPTR_0004s07160 Populus trichocarpa POPTR_0004s07160 I
POPTR_0004s07270 Populus trichocarpa POPTR_0004s07270 I
POPTR_0006s13530 Populus trichocarpa POPTR_0006s13530 I
POPTR_0014s08520 Populus trichocarpa POPTR_0014s08520 I
POPTR_0014s10240 Populus trichocarpa POPTR_0014s10240 I
POPTR_0016s08470 Populus trichocarpa POPTR_0016s08470 I
POPTR_0017s01140 Populus trichocarpa POPTR_0017s01140 I
POPTR_0017s01380 Populus trichocarpa POPTR_0017s01380 I
PRUPE_ppa004107mg Prunus persica PRUPE_ppa004107mg I
PRUPE_ppa005083mg Prunus persica PRUPE_ppa005083mg I
PRUPE_ppa006715mg Prunus persica PRUPE_ppa006715mg I
PRUPE_ppa008029mg Prunus persica PRUPE_ppa008029mg I
PRUPE_ppa008749mg Prunus persica PRUPE_ppa008749mg I
PRUPE_ppa011002mg Prunus persica PRUPE_ppa011002mg I
Sb04g031820 Sorghum bicolor Sb04g031820 I
Sb10g000590 Sorghum bicolor Sb10g000590 I
Sb10g030960 Sorghum bicolor Sb10g030960 I
SELMODRAFT_137893 Selaginella moellendorffii SELMODRAFT_137893 I
SELMODRAFT_19077 Selaginella moellendorffii SELMODRAFT_19077 I
SELMODRAFT_19475 Selaginella moellendorffii SELMODRAFT_19475 I
SELMODRAFT_29451 Selaginella moellendorffii SELMODRAFT_29451 I
SELMODRAFT_72682 Selaginella moellendorffii SELMODRAFT_72682 I
SELMODRAFT_78045 Selaginella moellendorffii SELMODRAFT_78045 I
SELMODRAFT_78481 Selaginella moellendorffii SELMODRAFT_78481 I
Si006457m.g Setaria italica Si006457m.g I
Si006824m.g Setaria italica Si006824m.g I
Si006883m.g Setaria italica Si006883m.g I
Si017977m.g Setaria italica Si017977m.g I
Solyc01g095030.2 Solanum lycopersicum Solyc01g095030.2 I
Solyc02g036370.2 Solanum lycopersicum Solyc02g036370.2 I
Solyc03g098320.2 Solanum lycopersicum Solyc03g098320.2 I
Solyc06g036300.2 Solanum lycopersicum Solyc06g036300.2 I
Solyc10g084370.1 Solanum lycopersicum Solyc10g084370.1 I
TCM_005269 Theobroma cacao TCM_005269 I
TCM_013400 Theobroma cacao TCM_013400 I
TCM_015255 Theobroma cacao TCM_015255 I
TCM_022074 Theobroma cacao TCM_022074 I
Traes_4AL_D00AB8CFA Triticum aestivum Traes_4AL_D00AB8CFA I
Traes_6AL_362F82EAD Triticum aestivum Traes_6AL_362F82EAD I
Traes_6DL_30F715B53 Triticum aestivum Traes_6DL_30F715B53 I
Traes_7AL_665B92F4E Triticum aestivum Traes_7AL_665B92F4E I
Traes_7BL_BA181D2AD Triticum aestivum Traes_7BL_BA181D2AD I
Traes_7DL_1D415A4CF Triticum aestivum Traes_7DL_1D415A4CF I
Traes_7DL_AB55D9F4E Triticum aestivum Traes_7DL_AB55D9F4E I
TRIUR3_01040 Triticum urartu TRIUR3_01040 I
TRIUR3_10644 Triticum urartu TRIUR3_10644 I
RVE1 Vitis vinifera VIT_04s0079g00410 I
VIT_08s0040g03220 Vitis vinifera VIT_08s0040g03220 I
VIT_15s0046g02260 Vitis vinifera VIT_15s0046g02260 I
VIT_16s0050g01180 Vitis vinifera VIT_16s0050g01180 I
Ca_13713 Cicer arietinum Ca_13713 I
Ca_14048 Cicer arietinum Ca_14048 I
Cla005022 Citrullus lanatus Cla005022 I
Cla009284 Citrullus lanatus Cla009284 I
Cla018126 Citrullus lanatus Cla018126 I
Cla021528 Citrullus lanatus Cla021528 I
Pm002840 Prunus mume Pm002840 I
Pm012998 Prunus mume Pm012998 I
Pm018226 Prunus mume Pm018226 I
Pm025253 Prunus mume Pm025253 I
Pm028732 Prunus mume Pm028732 I
29677.m000183 Ricinus communis 29677.m000183 I
29805.m001497 Ricinus communis 29805.m001497 I
30169.m006616 Ricinus communis 30169.m006616 I
30171.m000418 Ricinus communis 30171.m000418 I
cassava12928.valid.m1 Manihot esculenta cassava12928.valid.m1 I
cassava12929.valid.m1 Manihot esculenta cassava12929.valid.m1 I
cassava18980.valid.m1 Manihot esculenta cassava18980.valid.m1 I
cassava18981.valid.m1 Manihot esculenta cassava18981.valid.m1 I
cassava33517.m1 Manihot esculenta cassava33517.m1 I
cassava35529.valid.m1 Manihot esculenta cassava35529.valid.m1 I
cassava35530.valid.m1 Manihot esculenta cassava35530.valid.m1 I
cassava35531.valid.m1 Manihot esculenta cassava35531.valid.m1 I
cassava36811.valid.m1 Manihot esculenta cassava36811.valid.m1 I
cassava43542.valid.m1 Manihot esculenta cassava43542.valid.m1 I
cassava43543.valid.m1 Manihot esculenta cassava43543.valid.m1 I
cassava43544.valid.m1 Manihot esculenta cassava43544.valid.m1 I
cassava7251.valid.m1 Manihot esculenta cassava7251.valid.m1 I
Cucsa.108150 Cucumis sativus Cucsa.108150 I
Cucsa.192960 Cucumis sativus Cucsa.192960 I
Cucsa.258660 Cucumis sativus Cucsa.258660 I
Cucsa.278220 Cucumis sativus Cucsa.278220 I
Cucsa.307250 Cucumis sativus Cucsa.307250 I
e_gw1.96.88.1 Physcomitrella patens e_gw1.96.88.1 I
estExt_fgeneshNG_pg.C_380110 Naegleria gruberi estExt_fgeneshNG_pg.C_380110 I
estExt_Genewise1.C_5980003 Dictyostelium purpureum estExt_Genewise1.C_5980003 I
est_orfs.8_8223_4279363:1 Micromonas pusilla est_orfs.8_8223_4279363:1 I
EuGene.0400010070 Ostreococcus RCC809 EuGene.0400010070 I
fgenesh1_pg.scaffold_160000002 Physcomitrella patens fgenesh1_pg.scaffold_160000002 I
fgenesh1_pg.scaffold_198000070 Physcomitrella patens fgenesh1_pg.scaffold_198000070 I
gw1.46.107.1 Physcomitrella patens gw1.46.107.1 I
mgf001364m Mimulus guttatus mgf001364m I
mgf011909m Mimulus guttatus mgf011909m I
mgf012072m Mimulus guttatus mgf012072m I
mgf015175m Mimulus guttatus mgf015175m I
mgf018328m Mimulus guttatus mgf018328m I
Aquca_002_01329 Aquilegia coerulea Aquca_002_01329 I
Aquca_013_00181 Aquilegia coerulea Aquca_013_00181 I
Aquca_027_00135 Aquilegia coerulea Aquca_027_00135 I
Bostr.10064s0009 Boechera stricta Bostr.10064s0009 I
Bostr.2128s0168 Boechera stricta Bostr.2128s0168 I
Bostr.22252s0109 Boechera stricta Bostr.22252s0109 I
Bostr.2618s0066 Boechera stricta Bostr.2618s0066 I
Bostr.5325s0070 Boechera stricta Bostr.5325s0070 I
Bostr.7305s0060 Boechera stricta Bostr.7305s0060 I
Bostr.9638s0043 Boechera stricta Bostr.9638s0043 I
Cagra.0084s0014 Capsella grandiflora Cagra.0084s0014 I
Cagra.1968s0093 Capsella grandiflora Cagra.1968s0093 I
Cagra.2240s0021 Capsella grandiflora Cagra.2240s0021 I
Cagra.25009s0002 Capsella grandiflora Cagra.25009s0002 I
Cagra.6594s0025 Capsella grandiflora Cagra.6594s0025 I
Carubv10001399m.g Capsella rubella Carubv10001399m.g I
Carubv10001591m.g Capsella rubella Carubv10001591m.g I
Carubv10005376m.g Capsella rubella Carubv10005376m.g I
Carubv10011679m.g Capsella rubella Carubv10011679m.g I
Carubv10014328m.g Capsella rubella Carubv10014328m.g I
Carubv10026677m.g Capsella rubella Carubv10026677m.g I
Ciclev10005411m.g Citrus clementina Ciclev10005411m.g I
Ciclev10011554m.g Citrus clementina Ciclev10011554m.g I
Ciclev10012263m.g Citrus clementina Ciclev10012263m.g I
Ciclev10020939m.g Citrus clementina Ciclev10020939m.g I
estExt_fgenesh2_pg.C_Chr_080053 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_080053 I
estExt_fgenesh2_pg.C_Chr_110083 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_110083 I
Eucgr.A01184 Eucalyptus grandis Eucgr.A01184 I
Eucgr.A02733 Eucalyptus grandis Eucgr.A02733 I
Eucgr.D02320 Eucalyptus grandis Eucgr.D02320 I
Eucgr.F02906 Eucalyptus grandis Eucgr.F02906 I
evm.TU.supercontig_114.57 Carica papaya evm.TU.supercontig_114.57 I
evm.TU.supercontig_184.27 Carica papaya evm.TU.supercontig_184.27 I
gene09296-v1.0-hybrid Fragaria vesca gene09296-v1.0-hybrid I
gene13188-v1.0-hybrid Fragaria vesca gene13188-v1.0-hybrid I
gene18104-v1.0-hybrid Fragaria vesca gene18104-v1.0-hybrid I
gene19228-v1.0-hybrid Fragaria vesca gene19228-v1.0-hybrid I
Gorai.004G159700 Gossypium raimondii Gorai.004G159700 I
Gorai.006G178000 Gossypium raimondii Gorai.006G178000 I
Gorai.007G013200 Gossypium raimondii Gorai.007G013200 I
Gorai.007G102900 Gossypium raimondii Gorai.007G102900 I
Gorai.008G274500 Gossypium raimondii Gorai.008G274500 I
Gorai.008G293600 Gossypium raimondii Gorai.008G293600 I
Lus10007914.g Linum usitatissimum Lus10007914.g I
Lus10014015.g Linum usitatissimum Lus10014015.g I
Lus10019902.g Linum usitatissimum Lus10019902.g I
Lus10026365.g Linum usitatissimum Lus10026365.g I
Lus10027521.g Linum usitatissimum Lus10027521.g I
Lus10036392.g Linum usitatissimum Lus10036392.g I
Lus10038846.g Linum usitatissimum Lus10038846.g I
Lus10039284.g Linum usitatissimum Lus10039284.g I
Lus10042292.g Linum usitatissimum Lus10042292.g I
MDP0000140220 Malus domestica MDP0000140220 I
MDP0000186860 Malus domestica MDP0000186860 I
MDP0000187927 Malus domestica MDP0000187927 I
MDP0000193097 Malus domestica MDP0000193097 I
MDP0000254258 Malus domestica MDP0000254258 I
MDP0000269098 Malus domestica MDP0000269098 I
MDP0000282906 Malus domestica MDP0000282906 I
MDP0000298778 Malus domestica MDP0000298778 I
MDP0000325672 Malus domestica MDP0000325672 I
MDP0000581293 Malus domestica MDP0000581293 I
MDP0000795432 Malus domestica MDP0000795432 I
MDP0000890154 Malus domestica MDP0000890154 I
orange1.1g012625m.g Citrus sinensis orange1.1g012625m.g I
orange1.1g019104m.g Citrus sinensis orange1.1g019104m.g I
orange1.1g020389m.g Citrus sinensis orange1.1g020389m.g I
orange1.1g040811m.g Citrus sinensis orange1.1g040811m.g I
Pavir.Aa00937 Panicum virgatum Pavir.Aa00937 I
Pavir.Ca00604 Panicum virgatum Pavir.Ca00604 I
Pavir.Da00204 Panicum virgatum Pavir.Da00204 I
Pavir.Db00044 Panicum virgatum Pavir.Db00044 I
Pavir.Db00388 Panicum virgatum Pavir.Db00388 I
Pavir.J28634 Panicum virgatum Pavir.J28634 I
SapurV1A.0013s1130 Salix purpurea SapurV1A.0013s1130 I
SapurV1A.0099s0370 Salix purpurea SapurV1A.0099s0370 I
SapurV1A.0147s0490 Salix purpurea SapurV1A.0147s0490 I
SapurV1A.0247s0220 Salix purpurea SapurV1A.0247s0220 I
SapurV1A.0804s0060 Salix purpurea SapurV1A.0804s0060 I
SapurV1A.0985s0080 Salix purpurea SapurV1A.0985s0080 I
SapurV1A.0985s0170 Salix purpurea SapurV1A.0985s0170 I
SapurV1A.1218s0100 Salix purpurea SapurV1A.1218s0100 I
Thhalv10007028m.g Eutrema salsugineum Thhalv10007028m.g I
Thhalv10008382m.g Eutrema salsugineum Thhalv10008382m.g I
Thhalv10014025m.g Eutrema salsugineum Thhalv10014025m.g I
Thhalv10014069m.g Eutrema salsugineum Thhalv10014069m.g I
Thhalv10021220m.g Eutrema salsugineum Thhalv10021220m.g I
Thhalv10028153m.g Eutrema salsugineum Thhalv10028153m.g I
Thhalv10028806m.g Eutrema salsugineum Thhalv10028806m.g I
EFA77680.1 Polysphondylium pallidum EFA77680.1 I
PK02302.1 Cannabis sativa PK02302.1 I
PK06515.1 Cannabis sativa PK06515.1 I
PK28456.1 Cannabis sativa PK28456.1 I
LjSGA_026437.1 Lotus japonicus LjSGA_026437.1 I
LjT02J13.100.nc Lotus japonicus LjT02J13.100.nc I
PDK_20s1315421g001 Phoenix dactylifera PDK_20s1315421g001 I