estExt_fgenesh1_pg.C_100270 (Coccomyxa subellipsoidea C169)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 estExt_fgenesh1_pg.C_100270 T049574_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PIF5
M08047_2.00 		Arabidopsis thaliana
YCACRTGS
SCAYGTGR		 ChIP-seq
Mathelier et al.(2014)
MA0562.1 		0.851 0.469
PIF5
M09452_2.00 		Arabidopsis thaliana
NNBCAYGTGV
BCACRTGVNN		 Misc
Heinz et al.(2010)
Arabidopsis-PIF5ox_GSE35062 		0.851 0.469
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
47901 bHLH 112 160

Links

Other bHLH family TFs
Other Coccomyxa subellipsoidea C169 TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PIF5 Arabidopsis thaliana AT3G59060 D 0.851
OBART07G02670 Oryza barthii OBART07G02670 I 0.849
estExt_fgeneshCV_pg.C_120023 Chlorella vulgaris estExt_fgeneshCV_pg.C_120023 I 0.914
TRIUR3_14996 Triticum urartu TRIUR3_14996 I 0.848
OS07G0143200 Oryza sativa OS07G0143200 I 0.849
ORUFI07G02530 Oryza rufipogon ORUFI07G02530 I 0.849
ORGLA07G0023700 Oryza glaberrima ORGLA07G0023700 I 0.849
ONIVA07G01070 Oryza nivara ONIVA07G01070 I 0.849
OMERI07G01290 Oryza meridionalis OMERI07G01290 I 0.849
OB07G12160 Oryza brachyantha OB07G12160 I 0.852
GRMZM5G865967 Zea mays GRMZM5G865967 I 0.848
F775_31861 Aegilops tauschii F775_31861 I 0.848
BRADI1G06670 Brachypodium distachyon BRADI1G06670 I 0.848
Bo4g108070 Brassica oleracea Bo4g108070 I 0.851
BGIOSGA025137 Oryza indica BGIOSGA025137 I 0.849
CHLREDRAFT_183777 Chlamydomonas reinhardtii CHLREDRAFT_183777 N 0.864
IGS.gm_8_00085 Chlorella NC64A IGS.gm_8_00085 N 0.852