Pavir.J32610 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.J32610 T050930_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J32610.1.p bHLH 91 139

Links

Other bHLH family TFs
Other Panicum virgatum TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI2G03830 Brachypodium distachyon BRADI2G03830 I 0.912
Si002655m.g Setaria italica Si002655m.g I 0.912
cassava18812.valid.m1 Manihot esculenta cassava18812.valid.m1 I 0.839
LPERR01G03590 Leersia perrieri LPERR01G03590 I 0.891
Gorai.011G034000 Gossypium raimondii Gorai.011G034000 I 0.848
Lus10013917.g Linum usitatissimum Lus10013917.g I 0.839
GRMZM2G088443 Zea mays GRMZM2G088443 I 0.912
Pavir.Ca01107 Panicum virgatum Pavir.Ca01107 I 0.912
Pavir.Ea00439 Panicum virgatum Pavir.Ea00439 I 0.912
ORUFI05G04670 Oryza rufipogon ORUFI05G04670 N 0.891
PDK_20s1551661g004 Phoenix dactylifera PDK_20s1551661g004 N 0.842
OS05G0163900 Oryza sativa OS05G0163900 N 0.891
Sb03g005250 Sorghum bicolor Sb03g005250 N 0.914
Sb09g004820 Sorghum bicolor Sb09g004820 N 0.893
ORUFI01G04050 Oryza rufipogon ORUFI01G04050 N 0.914
Si012213m.g Setaria italica Si012213m.g N 0.914
Traes_1AS_96F0745A2 Triticum aestivum Traes_1AS_96F0745A2 N 0.873
Traes_1BS_1F372BED3 Triticum aestivum Traes_1BS_1F372BED3 N 0.873
Traes_1DS_CD79239C8 Triticum aestivum Traes_1DS_CD79239C8 N 0.873
Traes_3B_2DF1A6E5B Triticum aestivum Traes_3B_2DF1A6E5B N 0.864
TRAES3BF130100030CFD_g Triticum aestivum TRAES3BF130100030CFD_g N 0.864
TRIUR3_07421 Triticum urartu TRIUR3_07421 N 0.864
TRIUR3_12818 Triticum urartu TRIUR3_12818 N 0.873
TRIUR3_21807 Triticum urartu TRIUR3_21807 N 0.864
evm.TU.supercontig_21.7 Carica papaya evm.TU.supercontig_21.7 N 0.841
BGIOSGA002833 Oryza indica BGIOSGA002833 N 0.914
OBART05G04450 Oryza barthii OBART05G04450 N 0.891
BRADI2G34600 Brachypodium distachyon BRADI2G34600 N 0.866
F775_00759 Aegilops tauschii F775_00759 N 0.864
F775_01873 Aegilops tauschii F775_01873 N 0.873
GRMZM2G369629 Zea mays GRMZM2G369629 N 0.914
GSMUA_Achr5G29390_001 Musa acuminata GSMUA_Achr5G29390_001 N 0.845
LPERR05G03980 Leersia perrieri LPERR05G03980 N 0.891
MLOC_69121 Hordeum vulgare MLOC_69121 N 0.873
OB01G13800 Oryza brachyantha OB01G13800 N 0.914
OB05G14140 Oryza brachyantha OB05G14140 N 0.864
OBART01G03950 Oryza barthii OBART01G03950 N 0.914
ORGLA05G0041400 Oryza glaberrima ORGLA05G0041400 N 0.891
OGLUM01G04250 Oryza glumaepatula OGLUM01G04250 N 0.914
OGLUM05G04370 Oryza glumaepatula OGLUM05G04370 N 0.891
OLONG_015419 Oryza longistaminata OLONG_015419 N 0.891
OMERI01G03850 Oryza meridionalis OMERI01G03850 N 0.914
OMERI05G04410 Oryza meridionalis OMERI05G04410 N 0.891
ONIVA01G04390 Oryza nivara ONIVA01G04390 N 0.914
ONIVA05G04820 Oryza nivara ONIVA05G04820 N 0.891
OPUNC01G03610 Oryza punctata OPUNC01G03610 N 0.914
OPUNC05G04080 Oryza punctata OPUNC05G04080 N 0.891
ORGLA01G0034700 Oryza glaberrima ORGLA01G0034700 N 0.914