CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Thhalv10017126m.g
(
Eutrema salsugineum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Thhalv10017126m.g
T051246_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10017126m
bHLH
68
116
SRSHRLAEKRRRDRINSHLSALRKLVPDSDKLDKAALLATVIEQVKELK
Links
Other
bHLH
family TFs
Other
Eutrema salsugineum
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra000177
Brassica rapa
Bra000177
I
0.893
fgenesh2_kg.108__1__AT2G40200.1
Arabidopsis lyrata
fgenesh2_kg.108__1__AT2G40200.1
I
0.863
Gorai.011G292100
Gossypium raimondii
Gorai.011G292100
I
0.844
BHLH51
Arabidopsis thaliana
AT2G40200
N
0.884
Bo3g034790
Brassica oleracea
Bo3g034790
N
0.893
Bo4g188890
Brassica oleracea
Bo4g188890
N
0.884
Bra017024
Brassica rapa
Bra017024
N
0.884
fgenesh2_kg.4__2126__AT2G40200.1
Arabidopsis lyrata
fgenesh2_kg.4__2126__AT2G40200.1
N
0.839
Bostr.23794s0037
Boechera stricta
Bostr.23794s0037
N
0.884
Cagra.7053s0004
Capsella grandiflora
Cagra.7053s0004
N
0.884
Carubv10023707m.g
Capsella rubella
Carubv10023707m.g
N
0.884