CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Kwal_9999
(
Kluyveromyces waltii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Kwal_9999
T052133_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBF1
M00374_2.00
Saccharomyces cerevisiae
NCACGTGAY
RTCACGTGN
PBM
Berger et al.(2006)
Cbf1
0.866
0.878
CBF1
M01520_2.00
Saccharomyces cerevisiae
CACGTGAYH
DRTCACGTG
PBM
Zhu et al.(2009)
Cbf1
0.866
0.878
CBF1
M07440_2.00
Saccharomyces cerevisiae
TCACGTGH
DCACGTGA
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0281.1
0.866
0.878
CBF1
M08485_2.00
Saccharomyces cerevisiae
NCAYRTGN
NCAYRTGN
Misc
DeBoer et al.(2011)
YJR060W_1347
0.866
0.878
CBF1
M09483_2.00
Saccharomyces cerevisiae
KCACGTGAYN
NRTCACGTGM
Misc
Heinz et al.(2010)
Yeast-Cbf1_GSE29506
0.866
0.878
CBF1
M09897_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CBF1_02
0.866
0.878
CBF1
M09898_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CBF1_03
0.866
0.878
CBF1
M09899_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CBF1_04
0.866
0.878
CBF1
M09900_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CBF1_B
0.866
0.878
CBF1
M09901_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CBF1_Q6
0.866
0.878
CBF1
M00010_2.00
Saccharomyces cerevisiae
NDCACGTGANN
NNTCACGTGHN
PBM
Badis et al.(2008)
CBF1_2160
0.855
0.857
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Kwal_9999
bHLH
145
193
RKDSHKEVERRRRENINTAINKLSDLLPVKESSKASILLRAAEYILKLK
Links
Other
bHLH
family TFs
Other
Kluyveromyces waltii
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PLEOSDRAFT_1026709
Pleurotus ostreatus
PLEOSDRAFT_1026709
N
M413DRAFT_445041
Hebeloma cylindrosporum
M413DRAFT_445041
N
Moror_14523
Moniliophthora roreri
Moror_14523
N
MPER_14143
Moniliophthora perniciosa
MPER_14143
N
PAXRUDRAFT_134179
Paxillus rubicundulus
PAXRUDRAFT_134179
N
PHLGIDRAFT_72355
Phlebiopsis gigantea
PHLGIDRAFT_72355
N
PIIN_06165
Piriformospora indica
PIIN_06165
N
PILCRDRAFT_2231
Piloderma croceum
PILCRDRAFT_2231
N
PISMIDRAFT_677489
Pisolithus microcarpus
PISMIDRAFT_677489
N
M408DRAFT_332089
Serendipita vermifera
M408DRAFT_332089
N
POSPLDRAFT_106321
Postia placenta
POSPLDRAFT_106321
N
PUNSTDRAFT_35810
Punctularia strigosozonata
PUNSTDRAFT_35810
N
SCHCODRAFT_112825
Schizophyllum commune
SCHCODRAFT_112825
N
SCLCIDRAFT_1215700
Scleroderma citrinum
SCLCIDRAFT_1215700
N
SERLA73DRAFT_47923
Serpula lacrymans
SERLA73DRAFT_47923
N
V565_121420
Rhizoctonia solani
V565_121420
N
fgenesh1_pg.C_scaffold_9000399
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_9000399
N
EuGene5000151
Heterobasidion annosum
EuGene5000151
N
JAAARDRAFT_36714
Jaapia argillacea
JAAARDRAFT_36714
N
CC1G_01657
Coprinopsis cinerea
CC1G_01657
N
CY34DRAFT_93409
Suillus luteus
CY34DRAFT_93409
N
DICSQDRAFT_63611
Dichomitus squalens
DICSQDRAFT_63611
N
FOMPIDRAFT_1134046
Fomitopsis pinicola
FOMPIDRAFT_1134046
N
GALMADRAFT_245424
Galerina marginata
GALMADRAFT_245424
N
GLOTRDRAFT_41454
Gloeophyllum trabeum
GLOTRDRAFT_41454
N
HETIRDRAFT_248080
Heterobasidion irregulare
HETIRDRAFT_248080
N
HYDPIDRAFT_116574
Hydnomerulius pinastri
HYDPIDRAFT_116574
N
AGABI2DRAFT_76369
Agaricus bisporus
AGABI2DRAFT_76369
N
K443DRAFT_671476
Laccaria amethystina
K443DRAFT_671476
N
LACBIDRAFT_318917
Laccaria bicolor
LACBIDRAFT_318917
N
M378DRAFT_78050
Amanita muscaria
M378DRAFT_78050
N
M404DRAFT_171117
Pisolithus tinctorius
M404DRAFT_171117
N
M404DRAFT_72662
Pisolithus tinctorius
M404DRAFT_72662
N
M407DRAFT_11896
Tulasnella calospora
M407DRAFT_11896
N
M407DRAFT_173335
Tulasnella calospora
M407DRAFT_173335
N