LjSGA_008146.1 (Lotus japonicus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 LjSGA_008146.1 T052134_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK03576.1
M01119_2.00 		Cannabis sativa
NCACGTGCN
NGCACGTGN		 PBM
Lambert et al.(2019)
pTH10095 		0.839 0.653
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_008146.1 bHLH 286 334

Links

Other bHLH family TFs
Other Lotus japonicus TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK03576.1 Cannabis sativa PK03576.1 D 0.839
Ca_05750 Cicer arietinum Ca_05750 I 0.914
Thhalv10027709m.g Eutrema salsugineum Thhalv10027709m.g I 0.875
gene32494-v1.0-hybrid Fragaria vesca gene32494-v1.0-hybrid I 0.890
Carubv10004345m.g Capsella rubella Carubv10004345m.g I 0.875
Bostr.7200s0145 Boechera stricta Bostr.7200s0145 I 0.875
mgf005803m Mimulus guttatus mgf005803m I 0.855
cassava8594.m1 Manihot esculenta cassava8594.m1 I 0.856
Pm023805 Prunus mume Pm023805 I 0.890
TCM_016261 Theobroma cacao TCM_016261 I 0.865
PRUPE_ppa002762mg Prunus persica PRUPE_ppa002762mg I 0.890
POPTR_0003s12810 Populus trichocarpa POPTR_0003s12810 I 0.857
MTR_8g098275 Medicago truncatula MTR_8g098275 I 0.914
GLYMA08G01810 Glycine max GLYMA08G01810 I 0.914
GL3 Arabidopsis lyrata fgenesh2_kg.7__3280__AT5G41315.1 I 0.875
Bra025508 Brassica rapa Bra025508 I 0.875
Bo4g141990 Brassica oleracea Bo4g141990 I 0.875
GL3 Arabidopsis thaliana AT5G41315 I 0.875
BHLH2 Arabidopsis thaliana AT1G63650 N 0.851
GLYMA05G37770 Glycine max GLYMA05G37770 N 0.894
Bostr.29223s0199 Boechera stricta Bostr.29223s0199 N 0.851
Cagra.2104s0007 Capsella grandiflora Cagra.2104s0007 N 0.851
EGL3 Arabidopsis lyrata fgenesh2_kg.2__120__AT1G63650.2 N 0.851
Carubv10019965m.g Capsella rubella Carubv10019965m.g N 0.851