CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AALB007560
(
Anopheles albimanus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
AALB007560
T052357_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Msc
M01730_2.00
Mus musculus
NVCRKMYGBN
NVCRKMYGBN
PBM
Weirauch et al.(2014)
pTH5112
0.849
0.788
Tcf21
M01746_2.00
Mus musculus
RMCAKMTGK
MCAKMTGKY
PBM
Weirauch et al.(2014)
pTH5087
0.849
0.788
MSC
M02801_2.00
Homo sapiens
AACAGCTGTT
AACAGCTGTT
SELEX
Jolma et al.(2013)
MSC_1
0.849
0.788
Tcf21
M02819_2.00
Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB
SELEX
Jolma et al.(2013)
Tcf21_1
0.849
0.788
MSC
M04183_2.00
Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN
SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1
0.849
0.788
MSC
M04184_2.00
Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN
SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2
0.849
0.788
MSC
M04187_2.00
Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN
SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1
0.849
0.788
MSC
M04188_2.00
Homo sapiens
BRMCATATGKYN
NRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2
0.849
0.788
TCF21
M04092_2.00
Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV
SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1
0.849
0.788
TCF21
M04093_2.00
Homo sapiens
NRCCATATGKYV
BRMCATATGGYN
SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2
0.849
0.788
MSC
M04185_2.00
Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN
SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1
0.849
0.788
MSC
M04186_2.00
Homo sapiens
BRMCATATGKYV
BRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2
0.849
0.788
MSC
M04189_2.00
Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV
SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1
0.849
0.788
MSC
M04190_2.00
Homo sapiens
BRMCATATGKYV
BRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2
0.849
0.788
TCF21
M04094_2.00
Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV
SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1
0.849
0.788
TCF21
M04095_2.00
Homo sapiens
BACCATATGKYV
BRMCATATGGTV
SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2
0.849
0.788
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AALB007560-PA
bHLH
35
87
QRNAANARERARMRVLSKAFFNLKRNIPWVPADTKLSKLDTLRLAKNYINYLA
Links
Other
bHLH
family TFs
Other
Anopheles albimanus
TFs
162 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ttk
Drosophila melanogaster
FBgn0003870
D
0.000
AGAP003537
Anopheles gambiae
AGAP003537
I
0.000
ttk
Drosophila pseudoobscura
FBgn0075017
I
0.000
AMAM005072
Anopheles maculatus
AMAM005072
N
0.000
YQE_06302
Dendroctonus ponderosae
YQE_06302
N
0.000
Cflo_04979--XP_394394.3_APIME
Camponotus floridanus
Cflo_04979--XP_394394.3_APIME
N
0.000
Hsal_07865--XP_394394.3_APIME
Harpegnathos saltator
Hsal_07865--XP_394394.3_APIME
N
0.000
LDEC015482
Leptinotarsa decemlineata
LDEC015482
N
0.000
AALB002527
Anopheles albimanus
AALB002527
N
0.000
AARA006596
Anopheles arabiensis
AARA006596
N
0.000
ACOM028538
Anopheles coluzzii
ACOM028538
N
0.000
ADIR010659
Anopheles dirus
ADIR010659
N
0.000
AEPI000347
Anopheles epiroticus
AEPI000347
N
0.000
AFAF005531
Anopheles farauti
AFAF005531
N
0.000
NV13850
Nasonia vitripennis
NV13850
N
0.000
AMEC020799
Anopheles melas
AMEC020799
N
0.000
AMEM015214
Anopheles merus
AMEM015214
N
0.000
AQUA001676
Anopheles quadriannulatus
AQUA001676
N
0.000
ASTEI09330
Anopheles stephensi
ASTEI09330
N
0.000
MDOA011489
Musca domestica
MDOA011489
N
0.000
PPAI003518
Phlebotomus papatasi
PPAI003518
N
0.000
GM16442
Drosophila sechellia
FBgn0171357
N
0.000
AAEL003932
Aedes aegypti
AAEL003932
N
0.000
ACEP16657
Atta cephalotes
ACEP16657
N
0.000
ADAC002056
Anopheles darlingi
ADAC002056
N
0.000
BGIBMGA007530
Bombyx mori
BGIBMGA007530
N
0.000
CPIJ009647
Culex quinquefasciatus
CPIJ009647
N
0.000
GF22979
Drosophila ananassae
FBgn0099973
N
0.000
GH18647
Drosophila grimshawi
FBgn0126114
N
0.000
GI23126
Drosophila mojavensis
FBgn0145853
N
0.000
TC013842
Tribolium castaneum
TC013842
N
0.000
GJ23100
Drosophila virilis
FBgn0210202
N
0.000
GB47057
Apis mellifera
GB47057
N
0.000
HMEL015189
Heliconius melpomene
HMEL015189
N
0.000
KGM_19333
Danaus plexippus
KGM_19333
N
0.000
MCINX010146
Melitaea cinxia
MCINX010146
N
0.000
MESCA008988
Megaselia scalaris
MESCA008988
N
0.000
CpipJ_CPIJ009647
Culex pipiens
CpipJ_CPIJ009647
N
0.000
SINV13243
Solenopsis invicta
SINV13243
N
0.000