CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AARA007787
(
Anopheles arabiensis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
AARA007787
T052405_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Msc
M01730_2.00
Mus musculus
NVCRKMYGBN
NVCRKMYGBN
PBM
Weirauch et al.(2014)
pTH5112
0.849
0.788
Tcf21
M01746_2.00
Mus musculus
RMCAKMTGK
MCAKMTGKY
PBM
Weirauch et al.(2014)
pTH5087
0.849
0.788
MSC
M02801_2.00
Homo sapiens
AACAGCTGTT
AACAGCTGTT
SELEX
Jolma et al.(2013)
MSC_1
0.849
0.788
Tcf21
M02819_2.00
Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB
SELEX
Jolma et al.(2013)
Tcf21_1
0.849
0.788
MSC
M04183_2.00
Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN
SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1
0.849
0.788
MSC
M04184_2.00
Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN
SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2
0.849
0.788
MSC
M04187_2.00
Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN
SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1
0.849
0.788
MSC
M04188_2.00
Homo sapiens
BRMCATATGKYN
NRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2
0.849
0.788
TCF21
M04092_2.00
Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV
SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1
0.849
0.788
TCF21
M04093_2.00
Homo sapiens
NRCCATATGKYV
BRMCATATGGYN
SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2
0.849
0.788
MSC
M04185_2.00
Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN
SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1
0.849
0.788
MSC
M04186_2.00
Homo sapiens
BRMCATATGKYV
BRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2
0.849
0.788
MSC
M04189_2.00
Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV
SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1
0.849
0.788
MSC
M04190_2.00
Homo sapiens
BRMCATATGKYV
BRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2
0.849
0.788
TCF21
M04094_2.00
Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV
SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1
0.849
0.788
TCF21
M04095_2.00
Homo sapiens
BACCATATGKYV
BRMCATATGGTV
SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2
0.849
0.788
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AARA007787-PA
bHLH
35
87
QRNAANARERARMRVLSKAFFNLKRNIPWVPADTKLSKLDTLRLAKNYITYLA
Links
Other
bHLH
family TFs
Other
Anopheles arabiensis
TFs
162 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPSIG00000005394
Pelodiscus sinensis
ENSPSIG00000005394
N
prdm2
Xenopus tropicalis
XB-GENE-5957530
N
Ogr07692
Ophisaurus gracilis
Ogr07692
N
Myotis_brandtii_PRDM2_10022047
Myotis brandtii
Myotis_brandtii_PRDM2_10022047
N
Gfo_R002647
Geospiza fortis
Gfo_R002647
N
ENSP00000235372-D1
Bos grunniens
ENSP00000235372-D1
N
Cmyd_10020922
Chelonia mydas
Cmyd_10020922
N
Brh_R004016
Buceros rhinoceros
Brh_R004016
N
Alligator_sinensis_CCG015430.1
Alligator sinensis
Alligator_sinensis_CCG015430.1
N
Afo_R013021
Aptenodytes forsteri
Afo_R013021
N
Aan_R001472
Calypte anna
Aan_R001472
N
PRDM2
Tursiops truncatus
ENSTTRG00000005029
N
PRDM2
Anolis carolinensis
ENSACAG00000010749
N
PRDM2
Ornithorhynchus anatinus
ENSOANG00000009908
N
ENSMPUG00000016352
Mustela putorius furo
ENSMPUG00000016352
N
PRDM2
Myotis lucifugus
ENSMLUG00000006969
N
PRDM2
Meleagris gallopavo
ENSMGAG00000005888
N
ENSGALG00000004089
Gallus gallus
ENSGALG00000004089
N
ENSFALG00000009941
Ficedula albicollis
ENSFALG00000009941
N
PRDM2
Erinaceus europaeus
ENSEEUG00000014607
N
PRDM2
Equus caballus
ENSECAG00000008911
N
ENSCAFG00000016361
Canis familiaris
ENSCAFG00000016361
N
ENSAPLG00000014764
Anas platyrhynchos
ENSAPLG00000014764
N
ENSAMEG00000006714
Ailuropoda melanoleuca
ENSAMEG00000006714
N