CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ANCCAN_04319
(
Ancylostoma caninum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
ANCCAN_04319
T053411_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
hlh-11
M00931_2.00
Caenorhabditis elegans
ATCAGCTGA
TCAGCTGAT
PBM
Grove et al.(2009)
HLH11
0.869
0.865
crp
M03595_2.00
Drosophila melanogaster
AACAGCTGWT
AWCAGCTGTT
SELEX
Nitta et al.(2015)
crp_1
0.858
0.788
crp
M05937_2.00
Drosophila melanogaster
VAHCAGCTGAY
RTCAGCTGDWB
B1H
Zhu et al.(2011)
crp_SANGER_10_FBgn0001994
0.858
0.788
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ANCCAN_04319
bHLH
74
125
RRQIANCNERRRMQSINAGFQSLRALLPRKEGEKLSKAAILQHTADLIQQLQ
Links
Other
bHLH
family TFs
Other
Ancylostoma caninum
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GPLIN_000941800
Globodera pallida
GPLIN_000941800
I
ECANG7_05482
Echinococcus canadensis
ECANG7_05482
N
EmuJ_000768400
Echinococcus multilocularis
EmuJ_000768400
N
maker-nMf.1.1.scaf16231-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf16231-snap-gene-0.4
N
MhA1_Contig993.frz3.gene8
Meloidogyne hapla
MhA1_Contig993.frz3.gene8
N
TASK_0000901601
Taenia asiatica
TASK_0000901601
N
TsM_000643400
Taenia solium
TsM_000643400
N
TTAC_0000435501
Hydatigera taeniaeformis
TTAC_0000435501
N