HPBE_0000907401 (Heligmosomoides bakeri)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 HPBE_0000907401 T054174_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Nhlh2
M00756_2.00 		Mus musculus
NKCAGCTGHN
NDCAGCTGMN		 PBM
Weirauch et al.(2013)
pTH3037 		0.851 0.808
NHLH1
M02796_2.00 		Homo sapiens
CGCAGCTGCB
VGCAGCTGCG		 SELEX
Jolma et al.(2013)
NHLH1_1 		0.851 0.808
NHLH1
M02797_2.00 		Homo sapiens
VGCAGCTGCK
MGCAGCTGCB		 SELEX
Jolma et al.(2013)
NHLH1_2 		0.851 0.808
NHLH1
M04162_2.00 		Homo sapiens
NDGNMKCAGCTGCGYCMH
DKGRCGCAGCTGMKNCHN		 SELEX
Yin et al.(2017)
NHLH1_eDBD_HT-SELEX 		0.851 0.808
NHLH1
M04164_2.00 		Homo sapiens
NDGNMKCAGCTGCGYCMH
DKGRCGCAGCTGMKNCHN		 SELEX
Yin et al.(2017)
NHLH1_FL_HT-SELEX 		0.851 0.808
NHLH2
M04177_2.00 		Homo sapiens
DDGNMGCAGCTGCGYCMH
DKGRCGCAGCTGCKNCHH		 SELEX
Yin et al.(2017)
NHLH2_FL_HT-SELEX 		0.851 0.808
Nhlh1
M08773_2.00 		Mus musculus
BKGGNMNCAGCTGCGBCCYY
RRGGVCGCAGCTGNKNCCMV		 Misc
Kulakovskiy et al.(2013)
HEN1_MOUSE.H11MO.0.C 		0.851 0.808
NHLH1
M09875_2.00 		Homo sapiens
NNDGGNMVCAGCTGVGNCCNNN
NNNGGNCBCAGCTGBKNCCHNN		 Transfac
Matys et al.(2006)
V$HEN1_01 		0.851 0.808
NHLH1
M09876_2.00 		Homo sapiens
NDRGGVMGCAGCTGMKNCCHHN
NDDGGNMKCAGCTGCKBCCYHN		 Transfac
Matys et al.(2006)
V$HEN1_02 		0.851 0.808
NHLH2
M09878_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HEN2_Q2 		0.851 0.808
NHLH1
M04163_2.00 		Homo sapiens
NRGBMKCAGCTGCGYCCH
DGGRCGCAGCTGMKVCYN		 SELEX
Yin et al.(2017)
NHLH1_eDBD_Methyl-HT-SELEX 		0.851 0.808
NHLH1
M04165_2.00 		Homo sapiens
DGGNMBCAGCTGCGYCCH
DGGRCGCAGCTGVKNCCH		 SELEX
Yin et al.(2017)
NHLH1_FL_Methyl-HT-SELEX 		0.851 0.808
NHLH2
M04178_2.00 		Homo sapiens
DGGNMBCAGCTGCGYCCH
DGGRCGCAGCTGVKNCCH		 SELEX
Yin et al.(2017)
NHLH2_FL_Methyl-HT-SELEX 		0.851 0.808
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HPBE_0000907401-mRNA-1 bHLH 30 82

Links

Other bHLH family TFs
Other Heligmosomoides bakeri TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NHLH1 Homo sapiens ENSG00000171786 D 0.851
NHLH2 Homo sapiens ENSG00000177551 D 0.851
Nhlh2 Mus musculus ENSMUSG00000048540 D 0.851
Nhlh1 Mus musculus ENSMUSG00000051251 D 0.851
ACEP10202 Atta cephalotes ACEP10202 I 0.851
NHLH2 Anolis carolinensis ENSACAG00000003304 I 0.851
NHLH2 Bos taurus ENSBTAG00000015067 I 0.851
NHLH1 Bos taurus ENSBTAG00000020027 I 0.851
NHLH2 Canis familiaris ENSCAFG00000009767 I 0.851
NHLH1 Canis familiaris ENSCAFG00000023513 I 0.851
NHLH1 Callithrix jacchus ENSCJAG00000005775 I 0.851
NHLH2 Callithrix jacchus ENSCJAG00000012807 I 0.851
NHLH1 Cavia porcellus ENSCPOG00000021596 I 0.851
NHLH2 Cavia porcellus ENSCPOG00000026593 I 0.851
ENSCSAG00000000087 Chlorocebus sabaeus ENSCSAG00000000087 I 0.851
ENSCSAG00000000172 Chlorocebus sabaeus ENSCSAG00000000172 I 0.851
NHLH2 Dasypus novemcinctus ENSDNOG00000008961 I 0.851
NHLH1 Dasypus novemcinctus ENSDNOG00000038600 I 0.851
NHLH1 Equus caballus ENSECAG00000004612 I 0.851
NHLH1 Echinops telfairi ENSETEG00000009677 I 0.851
ENSFALG00000006103 Ficedula albicollis ENSFALG00000006103 I 0.851
ENSFCAG00000028313 Felis catus ENSFCAG00000028313 I 0.851
NHLH2 Gorilla gorilla ENSGGOG00000008283 I 0.851
NHLH1 Gorilla gorilla ENSGGOG00000015736 I 0.851
ENSLACG00000011363 Latimeria chalumnae ENSLACG00000011363 I 0.851
NHLH2 Loxodonta africana ENSLAFG00000007456 I 0.851
NHLH1 Loxodonta africana ENSLAFG00000011163 I 0.851
ENSMEUG00000003022 Macropus eugenii ENSMEUG00000003022 I 0.851
ENSMICG00000002851 Microcebus murinus ENSMICG00000002851 I 0.851
NHLH1 Microcebus murinus ENSMICG00000012700 I 0.851
NHLH2 Myotis lucifugus ENSMLUG00000015989 I 0.851
ENSMMUG00000008971 Macaca mulatta ENSMMUG00000008971 I 0.851
NHLH1 Macaca mulatta ENSMMUG00000021865 I 0.851
NHLH2 Monodelphis domestica ENSMODG00000023228 I 0.851
NHLH1 Monodelphis domestica ENSMODG00000024591 I 0.851
ENSMPUG00000019387 Mustela putorius furo ENSMPUG00000019387 I 0.851
ENSMPUG00000019473 Mustela putorius furo ENSMPUG00000019473 I 0.851
ENSNLEG00000013637 Nomascus leucogenys ENSNLEG00000013637 I 0.851
NHLH2 Ornithorhynchus anatinus ENSOANG00000009820 I 0.851
NHLH2 Oryctolagus cuniculus ENSOCUG00000015744 I 0.851
NHLH1 Otolemur garnettii ENSOGAG00000010592 I 0.851
NHLH2 Otolemur garnettii ENSOGAG00000034540 I 0.851
NHLH2 Ochotona princeps ENSOPRG00000006661 I 0.851
ENSPANG00000001481 Papio anubis ENSPANG00000001481 I 0.851
ENSPANG00000011970 Papio anubis ENSPANG00000011970 I 0.851
NHLH1 Procavia capensis ENSPCAG00000009061 I 0.851
ENSPPYG00000000632 Pongo abelii ENSPPYG00000000632 I 0.851
ENSPPYG00000000988 Pongo abelii ENSPPYG00000000988 I 0.851
NHLH2 Pan troglodytes ENSPTRG00000001149 I 0.851
NHLH1 Pan troglodytes ENSPTRG00000001551 I 0.851
NHLH1 Pteropus vampyrus ENSPVAG00000007987 I 0.851
NHLH2 Pteropus vampyrus ENSPVAG00000012688 I 0.851
Nhlh1 Rattus norvegicus ENSRNOG00000005166 I 0.851
Nhlh2 Rattus norvegicus ENSRNOG00000054375 I 0.851
ENSSHAG00000006613 Sarcophilus harrisii ENSSHAG00000006613 I 0.851
ENSSHAG00000015472 Sarcophilus harrisii ENSSHAG00000015472 I 0.851
NHLH1 Sus scrofa ENSSSCG00000006384 I 0.851
NHLH2 Sus scrofa ENSSSCG00000006744 I 0.851
ENSSTOG00000019698 Ictidomys tridecemlineatus ENSSTOG00000019698 I 0.851
ENSSTOG00000027988 Ictidomys tridecemlineatus ENSSTOG00000027988 I 0.851
NHLH1 Taeniopygia guttata ENSTGUG00000013389 I 0.851
ENSTSYG00000000582 Tarsius syrichta ENSTSYG00000000582 I 0.851
NHLH1 Tursiops truncatus ENSTTRG00000001840 I 0.851
NHLH2 Tursiops truncatus ENSTTRG00000003112 I 0.851
GB49291 Apis mellifera GB49291 I 0.851
GB53325 Apis mellifera GB53325 I 0.851
HelroG138545 Helobdella robusta HelroG138545 I 0.851
NV10733 Nasonia vitripennis NV10733 I 0.851
Alligator_sinensis_CCG011163.1 Alligator sinensis Alligator_sinensis_CCG011163.1 I 0.851
Cflo_11933--XP_001122281.1_APIME Camponotus floridanus Cflo_11933--XP_001122281.1_APIME I 0.851
Cmyd_10014342 Chelonia mydas Cmyd_10014342 I 0.851
ENSP00000302189 Macaca fascicularis ENSP00000302189 I 0.851
ENSP00000358519-D1 Bos grunniens ENSP00000358519-D1 I 0.851
ENSP00000405915 Macaca fascicularis ENSP00000405915 I 0.851
Hsal_11874--XP_001122281.1_APIME Harpegnathos saltator Hsal_11874--XP_001122281.1_APIME I 0.851
nhlh1.S Xenopus laevis XB-GENE-6252028 I 0.851
nhlh1 Xenopus tropicalis XB-GENE-989790 I 0.851
nhlh1.L Xenopus laevis XB-GENE-989792 I 0.851
ACAC_0000390701 Angiostrongylus cantonensis ACAC_0000390701 I 0.914
WUBG_01613 Wuchereria bancrofti WUBG_01613 N 0.842
Bm2735 Brugia malayi Bm2735 N 0.842
CBG02112 Caenorhabditis briggsae CBG02112 N 0.869
CBN13062 Caenorhabditis brenneri CBN13062 N 0.869
CJA03864 Caenorhabditis japonica CJA03864 N 0.849
CRE07382 Caenorhabditis remanei CRE07382 N 0.849
LOAG_02658 Loa loa LOAG_02658 N 0.842
Ppa-hlh-15 Pristionchus pacificus PPA18782 N 0.849
hlh-15 Caenorhabditis elegans WBGene00001959 N 0.849
WBGene00237417 Onchocerca volvulus WBGene00237417 N 0.866
ASIM_0000067201 Anisakis simplex ASIM_0000067201 N 0.870
ASU_01158 Ascaris suum ASU_01158 N 0.842
DME_0000232301 Dracunculus medinensis DME_0000232301 N 0.842
EEL_0000426601 Elaeophora elaphi EEL_0000426601 N 0.842
EVEC_0000118201 Enterobius vermicularis EVEC_0000118201 N 0.840
HPLM_0001523301 Haemonchus placei HPLM_0001523301 N 0.870
nAv.1.0.1.g06563 Acanthocheilonema viteae nAv.1.0.1.g06563 N 0.842
nDi.2.2.2.g01604 Dirofilaria immitis nDi.2.2.2.g01604 N 0.842
nOo.2.0.1.g02404 Onchocerca ochengi nOo.2.0.1.g02404 N 0.866
OFLC_0001357601 Onchocerca flexuosa OFLC_0001357601 N 0.842
PTRK_0001259000 Parastrongyloides trichosuri PTRK_0001259000 N 0.849
scaffold4-EXSNAP2012.68 Pristionchus exspectatus scaffold4-EXSNAP2012.68 N 0.849
TCNE_0000157901 Toxocara canis TCNE_0000157901 N 0.842