scaffold60-EXSNAP2012.12 (Pristionchus exspectatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 scaffold60-EXSNAP2012.12 T054850_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
hlh-11
M00931_2.00 		Caenorhabditis elegans
ATCAGCTGA
TCAGCTGAT		 PBM
Grove et al.(2009)
HLH11 		0.890 0.865
crp
M03595_2.00 		Drosophila melanogaster
AACAGCTGWT
AWCAGCTGTT		 SELEX
Nitta et al.(2015)
crp_1 		0.879 0.808
crp
M05937_2.00 		Drosophila melanogaster
VAHCAGCTGAY
RTCAGCTGDWB		 B1H
Zhu et al.(2011)
crp_SANGER_10_FBgn0001994 		0.879 0.808
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold60-EXSNAP2012.12 bHLH 39 90

Links

Other bHLH family TFs
Other Pristionchus exspectatus TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PV06_11680 Exophiala oligosperma PV06_11680 N
PTRG_10883 Pyrenophora triticirepentis PTRG_10883 N
PTT_06689 Pyrenophora teres PTT_06689 N
PV04_07764 Capronia semiimmersa PV04_07764 N
PV05_04423 Exophiala xenobiotica PV05_04423 N
PV05_10000 Exophiala xenobiotica PV05_10000 N
PV06_01131 Exophiala oligosperma PV06_01131 N
PV06_06048 Exophiala oligosperma PV06_06048 N
PV06_07837 Exophiala oligosperma PV06_07837 N
PV06_11257 Exophiala oligosperma PV06_11257 N
PV06_11661 Exophiala oligosperma PV06_11661 N
PEX1_062920 Penicillium expansum PEX1_062920 N
PV08_03348 Exophiala spinifera PV08_03348 N
PV11_03278 Exophiala sideris PV11_03278 N
SETTUDRAFT_92771 Setosphaeria turcica SETTUDRAFT_92771 N
SNOG_11030 Phaeosphaeria nodorum SNOG_11030 N
TRIATDRAFT_13310 Trichoderma atroviride TRIATDRAFT_13310 N
U727_00432581551 Penicillium solitum U727_00432581551 N
UCREL1_4695 Eutypa lata UCREL1_4695 N
estExt_Genewise1Plus.C_70733 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_70733 N
fgenesh1_pg.sca_28_chr13_5_0000057 Nectria haematococca fgenesh1_pg.sca_28_chr13_5_0000057 N
Pc13g03330 Penicillium chrysogenum Pc13g03330 N
HMPREF1120_00198 Exophiala dermatitidis HMPREF1120_00198 N
A1O1_01367 Capronia coronata A1O1_01367 N
A1O1_02535 Capronia coronata A1O1_02535 N
CADAFLAG00003334 Aspergillus flavus CADAFLAG00003334 N
ANIA_01584 Aspergillus nidulans CADANIAG00008217 N
ATEG_06092 Aspergillus terreus CADATEAG00000839 N
COCC4DRAFT_130965 Bipolaris maydis COCC4DRAFT_130965 N
COCCADRAFT_40088 Bipolaris zeicola COCCADRAFT_40088 N
COCMIDRAFT_30122 Bipolaris oryzae COCMIDRAFT_30122 N
COCSADRAFT_34052 Bipolaris sorokiniana COCSADRAFT_34052 N
COCVIDRAFT_20793 Bipolaris victoriae COCVIDRAFT_20793 N
A1O1_00464 Capronia coronata A1O1_00464 N
HMPREF1624_03990 Sporothrix schenckii HMPREF1624_03990 N
KUCA_T00000009001 Kuraishia capsulata KUCA_T00000009001 N
KUCA_T00003114001 Kuraishia capsulata KUCA_T00003114001 N
KUCA_T00003984001 Kuraishia capsulata KUCA_T00003984001 N
KUCA_T00003996001 Kuraishia capsulata KUCA_T00003996001 N
KUCA_T00004747001 Kuraishia capsulata KUCA_T00004747001 N
KUCA_T00005495001 Kuraishia capsulata KUCA_T00005495001 N
LEMA_P012820.1 Leptosphaeria maculans LEMA_P012820.1 N
NechaG88155 Fusarium solani NechaG88155 N
PCH_Pc13g03330 Penicillium rubens PCH_Pc13g03330 N