CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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snap_masked-nMf.1.1.scaf15800-processed-gene-0.1
(
Meloidogyne floridensis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
snap_masked-nMf.1.1.scaf15800-processed-gene-0.1
T054955_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
snap_masked-nMf.1.1.scaf15800-processed-gene-0.1-mRNA-1
bHLH
26
76
NLAAHNELEKNRRANLRGHLEALKSVLPPESDTHRDTTLSLLTRARNYIKM
Links
Other
bHLH
family TFs
Other
Meloidogyne floridensis
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bm5193
Brugia malayi
Bm5193
N
0.866
Minc02504
Meloidogyne incognita
Minc02504
N
0.882
Minc04681
Meloidogyne incognita
Minc04681
N
0.858
CGOC_0001417301
Cylicostephanus goldi
CGOC_0001417301
N
0.844
Hba_13962
Heterorhabditis bacteriophora
Hba_13962
N
0.869
L596_g5733
Steinernema carpocapsae
L596_g5733
N
0.854
MhA1_Contig33.frz3.gene10
Meloidogyne hapla
MhA1_Contig33.frz3.gene10
N
0.858
nAv.1.0.1.g03519
Acanthocheilonema viteae
nAv.1.0.1.g03519
N
0.866
nLs.2.1.2.g08650
Litomosoides sigmodontis
nLs.2.1.2.g08650
N
0.840
PEQ_0000470601
Parascaris equorum
PEQ_0000470601
N
0.844
SVUK_0001876601
Strongylus vulgaris
SVUK_0001876601
N
0.844