CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf07513-snap-gene-0.5
(
Meloidogyne floridensis
)
Brinker
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF09607 (BrkDBD)
IPR018586
maker-nMf.1.1.scaf07513-snap-gene-0.5
T055897_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf07513-snap-gene-0.5-mRNA-1
Brinker
129
182
VRRLSYPREFKLIVLHSYWTNGKNKYRTCKEFHITKSMLNGWLQKAEKIRNSRP
Links
Other
Brinker
family TFs
Other
Meloidogyne floridensis
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L596_g21980
Steinernema carpocapsae
L596_g21980
N
0.778
TELCIR_05319
Teladorsagia circumcincta
TELCIR_05319
N
0.741
TCNE_0001236501
Toxocara canis
TCNE_0001236501
N
0.741
TCLT_0000451401
Thelazia callipaeda
TCLT_0000451401
N
0.741
OFLC_0001358201
Onchocerca flexuosa
OFLC_0001358201
N
0.759
OESDEN_04377
Oesophagostomum dentatum
OESDEN_04377
N
0.741
nRc.2.0.1.g25601
Romanomermis culicivorax
nRc.2.0.1.g25601
N
0.741
nOo.2.0.1.g01013
Onchocerca ochengi
nOo.2.0.1.g01013
N
0.759
nLs.2.1.2.g00583
Litomosoides sigmodontis
nLs.2.1.2.g00583
N
0.759
NECAME_03414
Necator americanus
NECAME_03414
N
0.741
nDi.2.2.2.g02408
Dirofilaria immitis
nDi.2.2.2.g02408
N
0.759
nAv.1.0.1.g02191
Acanthocheilonema viteae
nAv.1.0.1.g02191
N
0.759
L898_g30040
Steinernema monticolum
L898_g30040
N
0.759
L893_g2345
Steinernema glaseri
L893_g2345
N
0.778
L892_g11079
Steinernema scapterisci
L892_g11079
N
0.778
L889_g15502
Steinernema feltiae
L889_g15502
N
0.778
WUBG_10166
Wuchereria bancrofti
WUBG_10166
N
0.759
HPLM_0001566201
Haemonchus placei
HPLM_0001566201
N
0.741
HCOI00202100
Haemonchus contortus
HCOI00202100
N
0.741
Hba_00636
Heterorhabditis bacteriophora
Hba_00636
N
0.722
GPUH_0002215801
Gongylonema pulchrum
GPUH_0002215801
N
0.722
EEL_0000340601
Elaeophora elaphi
EEL_0000340601
N
0.759
DME_0000413601
Dracunculus medinensis
DME_0000413601
N
0.759
D918_01735
Trichuris suis
D918_01735
N
0.704
ASIM_0001160201
Anisakis simplex
ASIM_0001160201
N
0.741
ANCCEY_04433
Ancylostoma ceylanicum
ANCCEY_04433
N
0.741
ANCCAN_15383
Ancylostoma caninum
ANCCAN_15383
N
0.741
ALUE_0001180601
Ascaris lumbricoides
ALUE_0001180601
N
0.741
Minc04978
Meloidogyne incognita
Minc04978
N
0.981
WBGene00237735
Onchocerca volvulus
WBGene00237735
N
0.759
LOAG_06215
Loa loa
LOAG_06215
N
0.741
Bm4813
Brugia malayi
Bm4813
N
0.759