CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PDP1
(
Anopheles gambiae
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
AGAP006376
T056685_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Pdp1
M03645_2.00
Drosophila melanogaster
VTTACGTAAB
VTTACGTAAB
SELEX
Nitta et al.(2015)
Pdp1_1
0.849
0.859
Pdp1
M03646_2.00
Drosophila melanogaster
RTTACGTAAY
RTTACGTAAY
SELEX
Nitta et al.(2015)
Pdp1_2
0.849
0.859
HLF
M02831_2.00
Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN
SELEX
Jolma et al.(2013)
HLF_1
0.822
0.672
Hlf
M02860_2.00
Mus musculus
KRTTACGTAAYN
NRTTACGTAAYM
SELEX
Jolma et al.(2013)
Hlf_1
0.822
0.672
HLF
M04245_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX
0.822
0.672
HLF
M04016_2.00
Homo sapiens
RTKAYRTAAB
VTTAYRTMAY
SELEX
Rodriguez-Martinez et al.(2017)
HLF.1
0.822
0.672
HLF
M08786_2.00
Homo sapiens
NRTTRYGTAAYMS
SKRTTACRYAAYN
Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C
0.822
0.672
Hlf
M08815_2.00
Mus musculus
VTTRTGYAABH
DVTTRCAYAAB
Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C
0.822
0.672
HLF
M09937_2.00
Homo sapiens
ATKRYGTAAY
RTTACRYMAT
Transfac
Matys et al.(2006)
V$HLF_01
0.822
0.672
HLF
M04246_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX
0.822
0.672
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AGAP006376-PA
bZIP
461
528
MKDDKYWARRRKNNMAAKRSRDARRMKENQIALRAGYLEKENMNLHREVEQLKQENMELRARLSKYQE
AGAP006376-PB
bZIP
397
464
MKDDKYWARRRKNNMAAKRSRDARRMKENQIALRAGYLEKENMNLHREVEQLKQENMELRARLSKYQE
Links
Other
bZIP
family TFs
Other
Anopheles gambiae
TFs
141 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M378DRAFT_42891
Amanita muscaria
M378DRAFT_42891
I
TMUE_s0212000700
Trichuris muris
TMUE_s0212000700
I
SMU15015648
Schmidtea mediterranea
SMU15015648
I
SMU15001430
Schmidtea mediterranea
SMU15001430
I
SMU15001429
Schmidtea mediterranea
SMU15001429
I
fgeneshMC_pg.8_#_228
Mucor circinelloides
fgeneshMC_pg.8_#_228
I
fgeneshMC_pg.7_#_500
Mucor circinelloides
fgeneshMC_pg.7_#_500
I
SERLA73DRAFT_18439
Serpula lacrymans
SERLA73DRAFT_18439
I
SCHCODRAFT_232950
Schizophyllum commune
SCHCODRAFT_232950
I
M407DRAFT_49125
Tulasnella calospora
M407DRAFT_49125
I
CC1G_03744
Coprinopsis cinerea
CC1G_03744
I
M378DRAFT_124313
Amanita muscaria
M378DRAFT_124313
I
LACBIDRAFT_311738
Laccaria bicolor
LACBIDRAFT_311738
I
KGM_14720
Danaus plexippus
KGM_14720
I
K443DRAFT_250430
Laccaria amethystina
K443DRAFT_250430
I
HelroG78096
Helobdella robusta
HelroG78096
I
GLOINDRAFT_52776
Rhizophagus irregularis
GLOINDRAFT_52776
I
DICSQDRAFT_32143
Dichomitus squalens
DICSQDRAFT_32143
I
CY34DRAFT_31998
Suillus luteus
CY34DRAFT_31998
I
M404DRAFT_20272
Pisolithus tinctorius
M404DRAFT_20272
N
RHTO_01537
Rhodosporidium toruloides
RHTO_01537
N
HYDPIDRAFT_154960
Hydnomerulius pinastri
HYDPIDRAFT_154960
N
SCLCIDRAFT_335403
Scleroderma citrinum
SCLCIDRAFT_335403
N
GLOINDRAFT_81833
Rhizophagus irregularis
GLOINDRAFT_81833
N
GALMADRAFT_1187634
Galerina marginata
GALMADRAFT_1187634
N
CERSUDRAFT_97591
Ceriporiopsis subvermispora
CERSUDRAFT_97591
N