TGA6 (Arabidopsis thaliana)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 AT3G12250 T056894_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA6
M01055_2.00		 Arabidopsis thaliana
NNVTGACGTMN
NKACGTCABNN		 PBM
Sullivan et al.(2014)
pTH8858		 (Direct) (Direct)
TGA6
M01780_2.00		 Arabidopsis thaliana
NNTGACGTMA
TKACGTCANN		 PBM
Weirauch et al.(2014)
pTH8691		 (Direct) (Direct)
TGA6
M06773_2.00		 Arabidopsis thaliana
DRTGACGTCAKCDNN
NNHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA6_col_a		 (Direct) (Direct)
TGA6
M06774_2.00		 Arabidopsis thaliana
NRTGACGTCAKCDNN
NNHGMTGACGTCAYN		 Dap-seq
OMalley et al.(2016)
TGA6_colamp_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA2
M01784_2.00 		Arabidopsis thaliana
NNACGTCABN
NVTGACGTNN		 PBM
Weirauch et al.(2014)
pTH8820 		0.805 0.980
TGA2
M00856_2.00 		Arabidopsis thaliana
NVTGACGTMN
NKACGTCABN		 PBM
Franco-Zorrilla et al.(2014)
TGA2 		0.805 0.980
TGA5
M01785_2.00 		Arabidopsis thaliana
VTGACGTN
NACGTCAB		 PBM
Weirauch et al.(2014)
pTH8180 		0.805 0.980
TGA2
M06785_2.00 		Arabidopsis thaliana
YNMCGYCABCD
HGVTGRCGKNR		 Dap-seq
OMalley et al.(2016)
TGA2_colamp_v31 		0.805 0.980
TGA2
M06786_2.00 		Arabidopsis thaliana
NNNNNDNHGMTGACGTCAYH
DRTGACGTCAKCDNHNNNNN		 Dap-seq
OMalley et al.(2016)
TGA2_col 		0.805 0.980
TGA5
M06787_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA5_col_v3a 		0.805 0.980
TGA2
M09917_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA2_01 		0.805 0.980
TGA2
M09918_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA2_Q2 		0.805 0.980
PK09021.1
M01155_2.00 		Cannabis sativa
NNTGACGTMA
TKACGTCANN		 PBM
Lambert et al.(2019)
pTH10175 		0.805 0.961
HBP1B_WHEAT
M10043_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HBP1B_Q6 		0.805 0.941
TGA9
M01053_2.00 		Arabidopsis thaliana
NNNMTGACGTHN
NDACGTCAKNNN		 PBM
Sullivan et al.(2014)
pTH9788 		0.790 0.882
TGA9
M06748_2.00 		Arabidopsis thaliana
RTGACGTCAKC
GMTGACGTCAY		 Dap-seq
OMalley et al.(2016)
TGA9_col_a 		0.790 0.882
TGA9
M06749_2.00 		Arabidopsis thaliana
TKACGTCAKCD
HGMTGACGTMA		 Dap-seq
OMalley et al.(2016)
TGA9_colamp_a 		0.790 0.882
For this family, TFs with SR scores > 0.782 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01055_2.00 bZIP 26 76
M01780_2.00 bZIP 26 76

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G12250.1 bZIP 42 92
AT3G12250.2 bZIP 42 92
AT3G12250.3 bZIP 36 86
AT3G12250.4 bZIP 67 117
AT3G12250.5 bZIP 15 65
AT3G12250.6 bZIP 42 92
AT3G12250.7 bZIP 42 92

Links

Other bZIP family TFs
Other Arabidopsis thaliana TFs

276 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action