CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo8g084770
(
Brassica oleracea
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
Bo8g084770
T057352_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK05128.1
M01154_2.00
Cannabis sativa
NNNDBGTRKN
NMYACVHNNN
PBM
Lambert et al.(2019)
pTH10099
0.793
0.714
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo8g084770.1
bZIP
227
289
TDVKRARRMLSNRESARRSRRRKQEQMNEFDTQVNQLRAEHSTLLGRLGDMNQKFDAAAVDNR
Links
Other
bZIP
family TFs
Other
Brassica oleracea
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400030946
Solanum tuberosum
PGSC0003DMG400030946
I
0.000
PK07533.1
Cannabis sativa
PK07533.1
I
0.000
MDP0000205823
Malus domestica
MDP0000205823
I
0.000
Lus10040428.g
Linum usitatissimum
Lus10040428.g
I
0.000
Gorai.007G122800
Gossypium raimondii
Gorai.007G122800
I
0.000
gene21832-v1.0-hybrid
Fragaria vesca
gene21832-v1.0-hybrid
I
0.000
evm.TU.supercontig_538.1
Carica papaya
evm.TU.supercontig_538.1
I
0.000
evm.TU.supercontig_18.43
Carica papaya
evm.TU.supercontig_18.43
I
0.000
Aquca_022_00003
Aquilegia coerulea
Aquca_022_00003
I
0.000
Aquca_003_00556
Aquilegia coerulea
Aquca_003_00556
I
0.000
mgf018581m
Mimulus guttatus
mgf018581m
I
0.000
cassava36049.valid.m1
Manihot esculenta
cassava36049.valid.m1
I
0.000
cassava23775.valid.m1
Manihot esculenta
cassava23775.valid.m1
I
0.000
VIT_03s0038g04450
Vitis vinifera
VIT_03s0038g04450
I
0.000
ONIVA05G02010
Oryza nivara
ONIVA05G02010
I
0.000
BGIOSGA019118
Oryza indica
BGIOSGA019118
I
0.000
GLYMA11G12240
Glycine max
GLYMA11G12240
I
0.000
GLYMA12G04440
Glycine max
GLYMA12G04440
I
0.000
GSMUA_Achr10G12910_001
Musa acuminata
GSMUA_Achr10G12910_001
I
0.000
GSMUA_Achr11G05140_001
Musa acuminata
GSMUA_Achr11G05140_001
I
0.000
GSMUA_Achr11G20700_001
Musa acuminata
GSMUA_Achr11G20700_001
I
0.000
GSMUA_Achr2G06540_001
Musa acuminata
GSMUA_Achr2G06540_001
I
0.000
MTR_1g087040
Medicago truncatula
MTR_1g087040
I
0.000
GSMUA_Achr8G29960_001
Musa acuminata
GSMUA_Achr8G29960_001
I
0.000
MLOC_52125
Hordeum vulgare
MLOC_52125
N
0.000
Pavir.J06041
Panicum virgatum
Pavir.J06041
N
0.000
Pavir.Ca00746
Panicum virgatum
Pavir.Ca00746
N
0.000
BRADI2G38380
Brachypodium distachyon
BRADI2G38380
N
0.000
Aquca_024_00067
Aquilegia coerulea
Aquca_024_00067
N
0.000
OMERI05G02170
Oryza meridionalis
OMERI05G02170
N
0.000
OB05G12090
Oryza brachyantha
OB05G12090
N
0.000
OBART05G02070
Oryza barthii
OBART05G02070
N
0.000
Traes_1DS_62FDD3493
Triticum aestivum
Traes_1DS_62FDD3493
N
0.000
Traes_1BS_A44C97E0F
Triticum aestivum
Traes_1BS_A44C97E0F
N
0.000
Traes_1AS_94B6230FB1
Triticum aestivum
Traes_1AS_94B6230FB1
N
0.000
Si023562m.g
Setaria italica
Si023562m.g
N
0.000
BGIOSGA019116
Oryza indica
BGIOSGA019116
N
0.000
OS05G0129300
Oryza sativa
OS05G0129300
N
0.000
ORUFI05G02170
Oryza rufipogon
ORUFI05G02170
N
0.000
ORGLA05G0020300
Oryza glaberrima
ORGLA05G0020300
N
0.000
OGLUM05G02130
Oryza glumaepatula
OGLUM05G02130
N
0.000