CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo9g175780
(
Brassica oleracea
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
Bo9g175780
T057376_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TGA10
M06783_2.00
Arabidopsis thaliana
NVTGACGTCAKCDNH
DNHGMTGACGTCABN
Dap-seq
OMalley et al.(2016)
TGA10_col_a
0.806
1.000
TGA10
M06784_2.00
Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA10_colamp_a
0.806
1.000
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo9g175780.1
bZIP
156
205
SDPKTLRRLAQNREAARKSRLRKKAYVQQLESCRIKLTQLEQEIQRARSQ
Links
Other
bZIP
family TFs
Other
Brassica oleracea
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SEPMUDRAFT_148959
Sphaerulina musiva
SEPMUDRAFT_148959
I
M378DRAFT_463994
Amanita muscaria
M378DRAFT_463994
I
Moror_12870
Moniliophthora roreri
Moror_12870
N
fgenesh3_kg.11__36__641_1_CCOZ_CCPA_CCPB_CCPC_EXTA
Heterobasidion annosum
fgenesh3_kg.11__36__641_1_CCOZ_CCPA_CCPB_CCPC_EXTA
N
fgenesh1_pg.C_scaffold_4000174
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_4000174
N
SERLA73DRAFT_181394
Serpula lacrymans
SERLA73DRAFT_181394
N
SCHCODRAFT_76401
Schizophyllum commune
SCHCODRAFT_76401
N
PLICRDRAFT_45259
Plicaturopsis crispa
PLICRDRAFT_45259
N
PLEOSDRAFT_174562
Pleurotus ostreatus
PLEOSDRAFT_174562
N
PISMIDRAFT_112540
Pisolithus microcarpus
PISMIDRAFT_112540
N
PILCRDRAFT_819471
Piloderma croceum
PILCRDRAFT_819471
N
PILCRDRAFT_401124
Piloderma croceum
PILCRDRAFT_401124
N
PHLGIDRAFT_125548
Phlebiopsis gigantea
PHLGIDRAFT_125548
N
PAXRUDRAFT_822144
Paxillus rubicundulus
PAXRUDRAFT_822144
N
PAXINDRAFT_170453
Paxillus involutus
PAXINDRAFT_170453
N
AGABI2DRAFT_191136
Agaricus bisporus
AGABI2DRAFT_191136
N
M413DRAFT_29155
Hebeloma cylindrosporum
M413DRAFT_29155
N
M378DRAFT_9324
Amanita muscaria
M378DRAFT_9324
N
LACBIDRAFT_296989
Laccaria bicolor
LACBIDRAFT_296989
N
K443DRAFT_670658
Laccaria amethystina
K443DRAFT_670658
N
JAAARDRAFT_47740
Jaapia argillacea
JAAARDRAFT_47740
N
JAAARDRAFT_194246
Jaapia argillacea
JAAARDRAFT_194246
N
HETIRDRAFT_439748
Heterobasidion irregulare
HETIRDRAFT_439748
N
GALMADRAFT_244440
Galerina marginata
GALMADRAFT_244440
N
FOMPIDRAFT_132799
Fomitopsis pinicola
FOMPIDRAFT_132799
N
CY34DRAFT_12675
Suillus luteus
CY34DRAFT_12675
N
CC1G_07059
Coprinopsis cinerea
CC1G_07059
N
BN946_scf184939.g72
Trametes cinnabarina
BN946_scf184939.g72
N