Bra003253 (Brassica rapa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bra003253 T057400_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DPBF3
M01133_2.00 		Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD		 PBM
Lambert et al.(2019)
pTH11531 		0.811 0.980
DPBF3
M01058_2.00 		Arabidopsis thaliana
HBACGTGKM
KMCACGTVD		 PBM
Sullivan et al.(2014)
pTH7219 		0.811 0.980
DPBF3
M01059_2.00 		Arabidopsis thaliana
NNMCACGTVN
NBACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7547 		0.811 0.980
DPBF3
M06777_2.00 		Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA		 Dap-seq
OMalley et al.(2016)
AREB3_colamp_a 		0.811 0.980
DPBF3
M06778_2.00 		Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA		 Dap-seq
OMalley et al.(2016)
AREB3_col_v31 		0.811 0.980
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra003253.1-P bZIP 331 382

Links

Other bZIP family TFs
Other Brassica rapa TFs

215 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASU_07762 Ascaris suum ASU_07762 N
TCNE_0001717001 Toxocara canis TCNE_0001717001 N
PEQ_0000179401 Parascaris equorum PEQ_0000179401 N
OFLC_0001133401 Onchocerca flexuosa OFLC_0001133401 N
OESDEN_21729 Oesophagostomum dentatum OESDEN_21729 N
OESDEN_10899 Oesophagostomum dentatum OESDEN_10899 N
nOo.2.0.1.g02446 Onchocerca ochengi nOo.2.0.1.g02446 N
nLs.2.1.2.g05187 Litomosoides sigmodontis nLs.2.1.2.g05187 N
nDi.2.2.2.g06500 Dirofilaria immitis nDi.2.2.2.g06500 N
nAv.1.0.1.g04153 Acanthocheilonema viteae nAv.1.0.1.g04153 N
HPBE_0000914901 Heligmosomoides bakeri HPBE_0000914901 N
HCOI00019900 Haemonchus contortus HCOI00019900 N
GPUH_0001236501 Gongylonema pulchrum GPUH_0001236501 N
EVEC_0000366901 Enterobius vermicularis EVEC_0000366901 N
DME_0000078101 Dracunculus medinensis DME_0000078101 N
BTMF_0000251301 Brugia timori BTMF_0000251301 N
WUBG_01220 Wuchereria bancrofti WUBG_01220 N
ANCCAN_03211 Ancylostoma caninum ANCCAN_03211 N
PPAI006116 Phlebotomus papatasi PPAI006116 N
LLOJ005741 Lutzomyia longipalpis LLOJ005741 N
LDEC010382 Leptinotarsa decemlineata LDEC010382 N
Hsal_12949--XP_001121257.1_APIME Harpegnathos saltator Hsal_12949--XP_001121257.1_APIME N
Cflo_10168--XP_001121257.1_APIME Camponotus floridanus Cflo_10168--XP_001121257.1_APIME N
YQE_05996 Dendroctonus ponderosae YQE_05996 N
WBGene00243099 Onchocerca volvulus WBGene00243099 N
SINV17602 Solenopsis invicta SINV17602 N
PHUM227240 Pediculus humanus PHUM227240 N
NV11270 Nasonia vitripennis NV11270 N
LOAG_18045 Loa loa LOAG_18045 N
GB42021 Apis mellifera GB42021 N
Bm7270 Brugia malayi Bm7270 N
ACEP10253 Atta cephalotes ACEP10253 N