CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN07104
(
Caenorhabditis brenneri
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
CBN07104
T057958_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
xbp-1
M00597_2.00
Caenorhabditis elegans
NNNNHKACGTGDN
NHCACGTMDNNNN
PBM
Narasimhan et al.(2015)
pTH10030
0.847
0.812
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN07104
bZIP
66
138
RKRERLNHLSQEEKMDRRKMKNRVAAQNARDKKKERSGKIDEVMRDLVAENVRLRAENEQLRRQNEELLLQQQ
Links
Other
bZIP
family TFs
Other
Caenorhabditis brenneri
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
xbp-1
Caenorhabditis elegans
WBGene00006959
D
0.847
CBG20165
Caenorhabditis briggsae
CBG20165
I
0.803
CJA11096
Caenorhabditis japonica
CJA11096
I
0.866
CRE06933
Caenorhabditis remanei
CRE06933
I
0.849