CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DAPPUDRAFT_102458
(
Daphnia pulex
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
DAPPUDRAFT_102458
T058664_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HLF
M02831_2.00
Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN
SELEX
Jolma et al.(2013)
HLF_1
0.794
0.651
Hlf
M02860_2.00
Mus musculus
KRTTACGTAAYN
NRTTACGTAAYM
SELEX
Jolma et al.(2013)
Hlf_1
0.794
0.651
HLF
M04245_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX
0.794
0.651
HLF
M04016_2.00
Homo sapiens
RTKAYRTAAB
VTTAYRTMAY
SELEX
Rodriguez-Martinez et al.(2017)
HLF.1
0.794
0.651
HLF
M08786_2.00
Homo sapiens
NRTTRYGTAAYMS
SKRTTACRYAAYN
Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C
0.794
0.651
Hlf
M08815_2.00
Mus musculus
VTTRTGYAABH
DVTTRCAYAAB
Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C
0.794
0.651
HLF
M09937_2.00
Homo sapiens
ATKRYGTAAY
RTTACRYMAT
Transfac
Matys et al.(2006)
V$HLF_01
0.794
0.651
HLF
M04246_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX
0.794
0.651
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFX81502
bZIP
354
417
KDDKYWARRRKNNMAAKRSRDARRVKENQIAMRANFLENKNADLQAEVEKWKKLYYATLKSLEK
Links
Other
bZIP
family TFs
Other
Daphnia pulex
TFs
92 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGUG_03137
Candida guilliermondii
PGUG_03137
N
0.000
MGU_03978
Metarhizium guizhouense
MGU_03978
N
0.000
Moror_3468
Moniliophthora roreri
Moror_3468
N
0.000