CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSFALG00000006360
(
Ficedula albicollis
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSFALG00000006360
T059652_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Batf
M08829_2.00
Mus musculus
NWSASTCAWHNNDDDANH
DNTHHHNNDWTGASTSWN
Misc
Kulakovskiy et al.(2013)
BATF_MOUSE.H11MO.0.A
0.866
0.873
Batf
M09495_2.00
Mus musculus
VTGASTCABH
DVTGASTCAB
Misc
Heinz et al.(2010)
Th17-BATF_GSE39756
0.866
0.873
BATF
M04307_2.00
Homo sapiens
NVVYGMCACN
NGTGKCRBBN
SELEX
Yin et al.(2017)
BATF_FL_HT-SELEX
0.855
0.873
BATF
M07821_2.00
Homo sapiens
TBASTCAWWNYDRRA
TYYHRNWWTGASTVA
ChIP-seq
Gerstein et al.(2012)
GM12878_BATF_HudsonAlpha
0.855
0.873
BATF
M08799_2.00
Homo sapiens
NWBASTCAWWHHRRRAVH
DBTYYYDDWWTGASTVWN
Misc
Kulakovskiy et al.(2013)
BATF_HUMAN.H11MO.0.A
0.855
0.873
BATF
M09971_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF_01
0.855
0.873
BATF
M09972_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF_02
0.855
0.873
BATF
M09973_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF_03
0.855
0.873
BATF
M09974_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF_04
0.855
0.873
BATF
M04308_2.00
Homo sapiens
NVVYGACACN
NGTGTCRBBN
SELEX
Yin et al.(2017)
BATF_FL_Methyl-HT-SELEX
0.855
0.873
BATF3
M02833_2.00
Homo sapiens
YGATGACGTCATCA
TGATGACGTCATCR
SELEX
Jolma et al.(2013)
BATF3_1
0.822
0.667
BATF3
M04268_2.00
Homo sapiens
BRTGACGTCABN
NVTGACGTCAYV
SELEX
Yin et al.(2017)
BATF3_eDBD_HT-SELEX
0.822
0.667
BATF3
M04270_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
BATF3_FL_HT-SELEX
0.822
0.667
BATF3
M04025_2.00
Homo sapiens
GRTGACGTCAYC
GRTGACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
BATF3.1
0.822
0.667
BATF3
M04026_2.00
Homo sapiens
GRTGACGTGGS
SCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
BATF3.2
0.822
0.667
BATF3
M08794_2.00
Homo sapiens
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN
Misc
Kulakovskiy et al.(2013)
BATF3_HUMAN.H11MO.0.B
0.822
0.667
BATF3
M09962_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF3_02
0.822
0.667
BATF3
M04269_2.00
Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN
SELEX
Yin et al.(2017)
BATF3_eDBD_Methyl-HT-SELEX
0.822
0.667
BATF3
M04271_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
BATF3_FL_Methyl-HT-SELEX
0.822
0.667
Batf3
M08826_2.00
Mus musculus
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN
Misc
Kulakovskiy et al.(2013)
BATF3_MOUSE.H11MO.0.A
0.814
0.619
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFALP00000006632
bZIP
26
88
DDMRKVQRREKNRIAAQKSRLRQTQKADTLHLESEDLERQNAALRREIKQLTEEMKHFTSMLN
Links
Other
bZIP
family TFs
Other
Ficedula albicollis
TFs
119 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fru
Drosophila melanogaster
FBgn0004652
D
LCUP000004
Lucilia cuprina
LCUP000004
N
PPAI009120
Phlebotomus papatasi
PPAI009120
N
ASTEI06221
Anopheles stephensi
ASTEI06221
N
ASIS015766
Anopheles sinensis
ASIS015766
N
AQUA007866
Anopheles quadriannulatus
AQUA007866
N
AMEM004700
Anopheles merus
AMEM004700
N
AMEC021072
Anopheles melas
AMEC021072
N
AMAM021405
Anopheles maculatus
AMAM021405
N
AFAF017729
Anopheles farauti
AFAF017729
N
AEPI005660
Anopheles epiroticus
AEPI005660
N
ACUA019185
Anopheles culicifacies
ACUA019185
N
ACHR008462
Anopheles christyi
ACHR008462
N
CpipJ_CPIJ010848
Culex pipiens
CpipJ_CPIJ010848
N
NV31560
Nasonia vitripennis
NV31560
N
MESCA009817
Megaselia scalaris
MESCA009817
N
fru
Drosophila pseudoobscura
FBgn0262676
N
GE25194
Drosophila yakuba
FBgn0242278
N
GE25193
Drosophila yakuba
FBgn0242277
N
GJ10827
Drosophila virilis
FBgn0198097
N
GL23181
Drosophila persimilis
FBgn0160771
N
GH19220
Drosophila grimshawi
FBgn0126686
N
fru
Drosophila erecta
FBgn0029419
N
CPIJ010848
Culex quinquefasciatus
CPIJ010848
N
AAEL006301
Aedes aegypti
AAEL006301
N