CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ATF6B
(
Gorilla gorilla
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSGGOG00000004870
T059881_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATF6B
M04375_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_1
0.883
1.000
ATF6B
M04376_2.00
Homo sapiens
NRTGACGTGGCR
YGCCACGTCAYN
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_2
0.883
1.000
ATF6B
M04377_2.00
Homo sapiens
TGCCACGTGGCR
YGCCACGTGGCA
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_3
0.883
1.000
ATF6B
M04041_2.00
Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.1
0.883
1.000
ATF6B
M04042_2.00
Homo sapiens
YGMCACGTGKCR
YGMCACGTGKCR
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.2
0.883
1.000
ATF6B
M04043_2.00
Homo sapiens
RTGACGTCAYC
GRTGACGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.3
0.883
1.000
ATF6B
M04044_2.00
Homo sapiens
MCCACGATGT
ACATCGTGGK
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.4
0.883
1.000
ATF6B
M04378_2.00
Homo sapiens
SRTGACGTCAYB
VRTGACGTCAYS
SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_1
0.883
1.000
ATF6B
M04379_2.00
Homo sapiens
BRTGACGTGGCR
YGCCACGTCAYV
SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_2
0.883
1.000
ATF6
M04254_2.00
Homo sapiens
YKRTGACGTGGCAN
NTGCCACGTCAYMR
SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_1
0.832
0.625
ATF6
M04255_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_2
0.832
0.625
ATF6
M04018_2.00
Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.1
0.832
0.625
ATF6
M04019_2.00
Homo sapiens
KAGTCACGTGK
MCACGTGACTM
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.2
0.832
0.625
ATF6
M04020_2.00
Homo sapiens
BNRTGACGTCATCA
TGATGACGTCAYNV
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.3
0.832
0.625
ATF6
M04021_2.00
Homo sapiens
ACCACGATGTY
RACATCGTGGT
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.4
0.832
0.625
ATF6
M08790_2.00
Homo sapiens
VBSSTGACGTGG
CCACGTCASSVB
Misc
Kulakovskiy et al.(2013)
ATF6A_HUMAN.H11MO.0.B
0.832
0.625
ATF6
M09947_2.00
Homo sapiens
TGACGTGG
CCACGTCA
Transfac
Matys et al.(2006)
V$ATF6_01
0.832
0.625
ATF6
M04256_2.00
Homo sapiens
YGRTGACGTGGCRN
NYGCCACGTCAYCR
SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_1
0.832
0.625
ATF6
M04257_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_2
0.832
0.625
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000004775
bZIP
323
389
AKLLKRQQRMIKNRESACQSRRKKKEYLQGLEARLQAVLADNQQLRRENAALRRRLEALLAENSELK
Links
Other
bZIP
family TFs
Other
Gorilla gorilla
TFs
111 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action