CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLACG00000002076
(
Latimeria chalumnae
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSLACG00000002076
T059981_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Cebpb
M02636_2.00
Mus musculus
VTKDYGYAAB
VTTRCRHMAB
PBM
Tillo et al.(2017)
CEBPB_C
0.867
0.869
Cebpb
M00999_2.00
Mus musculus
VTKDYGYAAB
VTTRCRHMAB
PBM
Mann et al.(2013)
CEBPB_UM_HK
0.867
0.869
Cebpb
M00761_2.00
Mus musculus
NTKDHGHAAB
VTTDCDHMAN
PBM
Weirauch et al.(2013)
pTH3208
0.867
0.869
Cebpb
M01818_2.00
Mus musculus
VTKDYGYAAB
VTTRCRHMAB
PBM
Weirauch et al.(2014)
pTH5460
0.867
0.869
CEBPB
M02851_2.00
Homo sapiens
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPB_1
0.867
0.869
CEBPB
M02852_2.00
Homo sapiens
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPB_2
0.867
0.869
Cebpb
M02867_2.00
Mus musculus
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
Cebpb_1
0.867
0.869
CEBPB
M04331_2.00
Homo sapiens
NVTTRCGCAAYN
NRTTGCGYAABN
SELEX
Yin et al.(2017)
CEBPB_eDBD_HT-SELEX
0.867
0.869
CEBPB
M05840_2.00
Homo sapiens
RTTRCGYAAYM
KRTTRCGYAAY
SMiLE-seq
Isakova et al.(2017)
CEBPb
0.867
0.869
CEBPB
M07830_2.00
Homo sapiens
NNDRTKDYGCAAYN
NRTTGCRHMAYHNN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_CEBPB_Stanford
0.867
0.869
CEBPB
M07831_2.00
Homo sapiens
RTKRYGCAAYV
BRTTGCRYMAY
ChIP-seq
Gerstein et al.(2012)
HepG2_CEBPB_Stanford
0.867
0.869
CEBPB
M07832_2.00
Homo sapiens
DRTKRYGCAAYVNN
NNBRTTGCRYMAYH
ChIP-seq
Gerstein et al.(2012)
K562_CEBPB_Stanford
0.867
0.869
CEBPB
M08804_2.00
Homo sapiens
DRTKDHGCAAYV
BRTTGCDHMAYH
Misc
Kulakovskiy et al.(2013)
CEBPB_HUMAN.H11MO.0.A
0.867
0.869
Cebpb
M08841_2.00
Mus musculus
DRTKDHGCAAB
VTTGCDHMAYH
Misc
Kulakovskiy et al.(2013)
CEBPB_MOUSE.H11MO.0.A
0.867
0.869
Cebpb
M09498_2.00
Mus musculus
GTTGYRCAAT
ATTGYRCAAC
Misc
Heinz et al.(2010)
ThioMac-CEBPb_GSE21512
0.867
0.869
CEBPB
M09993_2.00
Homo sapiens
RNRTKDDGHAAKNN
NNMTTDCHHMAYNY
Transfac
Matys et al.(2006)
V$CEBPB_01
0.867
0.869
CEBPB
M09994_2.00
Homo sapiens
NDRTKDHGCAABMH
DKVTTGCDHMAYHN
Transfac
Matys et al.(2006)
V$CEBPB_02
0.867
0.869
CEBPB
M09995_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_04
0.867
0.869
CEBPB
M09996_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_07
0.867
0.869
CEBPB
M09997_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_Q3
0.867
0.869
CEBPB
M09998_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_Q6
0.867
0.869
Cebpb
M02633_2.00
Mus musculus
VTKDNGHAAB
VTTDCNHMAB
PBM
Tillo et al.(2017)
CEBPB_5hmC
0.867
0.869
Cebpb
M02634_2.00
Mus musculus
TKDYGYAAYN
NRTTRCRHMA
PBM
Tillo et al.(2017)
CEBPB_5mCG
0.867
0.869
Cebpb
M02635_2.00
Mus musculus
YKDYGHAAYN
NRTTDCRHMR
PBM
Tillo et al.(2017)
CEBPB_5mC
0.867
0.869
Cebpb
M00998_2.00
Mus musculus
NTTDCGCAA
TTGCGHAAN
PBM
Mann et al.(2013)
CEBPB_M_HK
0.867
0.869
CEBPB
M04332_2.00
Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN
SELEX
Yin et al.(2017)
CEBPB_eDBD_Methyl-HT-SELEX
0.867
0.869
Cebpa
M00994_2.00
Mus musculus
TTDCGCAA
TTGCGHAA
PBM
Mann et al.(2013)
CEBPA_UM_HK
0.817
0.689
Cebpa
M01811_2.00
Mus musculus
VTKDYRHMAB
VTKDYRHMAB
PBM
Weirauch et al.(2014)
pTH5166
0.817
0.689
CEBPA
M04045_2.00
Homo sapiens
NVTKRCGCAABN
NVTTGCGYMABN
SELEX
Rodriguez-Martinez et al.(2017)
CEBPA.1
0.817
0.689
CEBPA
M08076_2.00
Homo sapiens
DRTTDTGCAAY
RTTGCAHAAYH
ChIP-seq
Mathelier et al.(2014)
MA0102.3
0.817
0.689
CEBPA
M08813_2.00
Homo sapiens
NVTKKWGCAABN
NVTTGCWMMABN
Misc
Kulakovskiy et al.(2013)
CEBPA_HUMAN.H11MO.0.A
0.817
0.689
Cebpa
M08830_2.00
Mus musculus
DVTKDNGCAAB
VTTGCNHMABH
Misc
Kulakovskiy et al.(2013)
CEBPA_MOUSE.H11MO.0.A
0.817
0.689
CEBPA
M10023_2.00
Homo sapiens
NNNWHWVCAMWBN
NVWKTGBWDWNNN
Transfac
Matys et al.(2006)
V$CEBP_01
0.817
0.689
CEBPA
M10024_2.00
Homo sapiens
NNNTKDNSYAAHNN
NNDTTRSNHMANNN
Transfac
Matys et al.(2006)
V$CEBPA_01
0.817
0.689
CEBPA
M10025_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPA_04
0.817
0.689
CEBPA
M10026_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPA_Q4
0.817
0.689
CEBPA
M10027_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPA_Q6
0.817
0.689
CEBPA
M10028_2.00
Homo sapiens
NGWVTKHBGYAAKVBAYD
HRTVBMTTRCVDMABWCN
Transfac
Matys et al.(2006)
V$CEBP_C
0.817
0.689
CEBPA
M10029_2.00
Homo sapiens
NNNTKDHSCAANNN
NNNTTGSDHMANNN
Transfac
Matys et al.(2006)
V$CEBP_Q2
0.817
0.689
Cebpa
M00993_2.00
Mus musculus
NTTDCGCAA
TTGCGHAAN
PBM
Mann et al.(2013)
CEBPA_M_HK
0.817
0.689
CEBPE
M02824_2.00
Homo sapiens
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPE_1
0.807
0.738
CEBPE
M02729_2.00
Homo sapiens
VTTDYRHAAY
RTTDYRHAAB
SELEX
Jolma et al.(2010)
CEBPE_dimer
0.807
0.738
CEBPE
M04227_2.00
Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN
SELEX
Yin et al.(2017)
CEBPE_eDBD_HT-SELEX
0.807
0.738
CEBPE
M04009_2.00
Homo sapiens
NVTKRYRCAABN
NVTTGYRYMABN
SELEX
Rodriguez-Martinez et al.(2017)
CEBPE.1
0.807
0.738
CEBPE
M08783_2.00
Homo sapiens
VHDATTDCVHAM
KTDBGHAATHDB
Misc
Kulakovskiy et al.(2013)
CEBPE_HUMAN.H11MO.0.A
0.807
0.738
CEBPE
M09927_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPE_01
0.807
0.738
CEBPE
M09928_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPE_Q6_01
0.807
0.738
CEBPE
M09929_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPE_Q6
0.807
0.738
CEBPE
M04228_2.00
Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN
SELEX
Yin et al.(2017)
CEBPE_eDBD_Methyl-HT-SELEX
0.807
0.738
Cebpe
M01815_2.00
Mus musculus
TKDYGCAA
TTGCRHMA
PBM
Weirauch et al.(2014)
pTH5253
0.805
0.738
Cebpe
M08836_2.00
Mus musculus
VHDATTDCVHAM
KTDBGHAATHDB
Misc
Kulakovskiy et al.(2013)
CEBPE_MOUSE.H11MO.0.A
0.805
0.738
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLACP00000002325
bZIP
217
277
EEYKQRRERNNVAVRKSRDKAKLRNMETQHKVLELSAENERLQKKVEQLTRELTTLRNLFK
Links
Other
bZIP
family TFs
Other
Latimeria chalumnae
TFs
143 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SETTUDRAFT_66917
Setosphaeria turcica
SETTUDRAFT_66917
N
0.000
MBM_09637
Marssonina brunnea
MBM_09637
N
0.000
MBR_03402
Metarhizium brunneum
MBR_03402
N
0.000
MGG_10528
Magnaporthe oryzae
MGG_10528
N
0.000
MGU_02792
Metarhizium guizhouense
MGU_02792
N
0.000
MYCTH_2299532
Myceliophthora thermophila
MYCTH_2299532
N
0.000
OIDMADRAFT_53431
Oidiodendron maius
OIDMADRAFT_53431
N
0.000
PFICI_01056
Pestalotiopsis fici
PFICI_01056
N
0.000
PTT_13565
Pyrenophora teres
PTT_13565
N
0.000
PV04_06869
Capronia semiimmersa
PV04_06869
N
0.000
PV05_08217
Exophiala xenobiotica
PV05_08217
N
0.000
PV07_03011
Cladophialophora immunda
PV07_03011
N
0.000
PV09_06680
Verruconis gallopava
PV09_06680
N
0.000
PV11_07148
Exophiala sideris
PV11_07148
N
0.000
S40285_00671
Stachybotrys chlorohalonata
S40285_00671
N
0.000
MANI_001311
Metarhizium anisopliae
MANI_001311
N
0.000
SNOG_08898
Phaeosphaeria nodorum
SNOG_08898
N
0.000
SPBR_02702
Sporothrix brasiliensis
SPBR_02702
N
0.000
UCRNP2_5032
Neofusicoccum parvum
UCRNP2_5032
N
0.000
UV8b_4792
Ustilaginoidea virens
UV8b_4792
N
0.000
VDAG_03482
Verticillium dahliae
VDAG_03482
N
0.000
VHEMI06241
Torrubiella hemipterigena
VHEMI06241
N
0.000
W97_00259
Coniosporium apollinis
W97_00259
N
0.000
X797_003963
Metarhizium robertsii
X797_003963
N
0.000
Z517_05634
Fonsecaea pedrosoi
Z517_05634
N
0.000
Z518_05834
Rhinocladiella mackenziei
Z518_05834
N
0.000
Z519_08018
Cladophialophora bantiana
Z519_08018
N
0.000
estExt_fgenesh1_pg.C_20315
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_20315
N
0.000
estExt_Genewise1Plus.C_30186
Cryphonectria parasitica
estExt_Genewise1Plus.C_30186
N
0.000
CSUB01_03140
Colletotrichum sublineola
CSUB01_03140
N
0.000
A1O5_05129
Cladophialophora psammophila
A1O5_05129
N
0.000
ACRE_019110
Acremonium chrysogenum
ACRE_019110
N
0.000
BBA_01981
Beauveria bassiana
BBA_01981
N
0.000
Bcin11g03650
Botrytis cinerea
Bcin11g03650
N
0.000
CH063_02883
Colletotrichum higginsianum
CH063_02883
N
0.000
CMQ_7236
Grosmannia clavigera
CMQ_7236
N
0.000
Cob_07468
Colletotrichum orbiculare
Cob_07468
N
0.000
COCC4DRAFT_18753
Bipolaris maydis
COCC4DRAFT_18753
N
0.000
COCCADRAFT_37755
Bipolaris zeicola
COCCADRAFT_37755
N
0.000
COCMIDRAFT_38152
Bipolaris oryzae
COCMIDRAFT_38152
N
0.000
COCSADRAFT_212000
Bipolaris sorokiniana
COCSADRAFT_212000
N
0.000
COCVIDRAFT_32531
Bipolaris victoriae
COCVIDRAFT_32531
N
0.000
CPUR_04455
Claviceps purpurea
CPUR_04455
N
0.000
A1O3_09901
Capronia epimyces
A1O3_09901
N
0.000
F503_05665
Ophiostoma piceae uamh
F503_05665
N
0.000
FFUJ_01093
Fusarium fujikuroi
FFUJ_01093
N
0.000
FGRRES_00574
Fusarium graminearum
FGRRES_00574
N
0.000
FOXG_00477
Fusarium oxysporum
FOXG_00477
N
0.000
FPSE_03135
Fusarium pseudograminearum
FPSE_03135
N
0.000
G647_06073
Cladophialophora carrionii
G647_06073
N
0.000
GGTG_05714
Gaeumannomyces graminis
GGTG_05714
N
0.000
GLRG_11037
Colletotrichum graminicola
GLRG_11037
N
0.000
HMPREF1120_04205
Exophiala dermatitidis
HMPREF1120_04205
N
0.000
HMPREF1624_02645
Sporothrix schenckii
HMPREF1624_02645
N
0.000
MAC_03038
Metarhizium acridum
MAC_03038
N
0.000
MAJ_00705
Metarhizium majus
MAJ_00705
N
0.000
MAM_01897
Metarhizium album
MAM_01897
N
0.000