CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CREM
(
Monodelphis domestica
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSMODG00000006900
T060354_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CREM
M04229_2.00
Homo sapiens
VVTBACGTVABN
NVTBACGTVABB
SELEX
Yin et al.(2017)
CREM_eDBD_HT-SELEX
0.911
1.000
CREM
M08784_2.00
Homo sapiens
SVVTGACGTSA
TSACGTCABBS
Misc
Kulakovskiy et al.(2013)
CREM_HUMAN.H11MO.0.C
0.911
1.000
CREM
M09930_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREM_Q6_01
0.911
1.000
CREM
M09931_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREM_Q6
0.911
1.000
CREM
M04230_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREM_eDBD_Methyl-HT-SELEX
0.911
1.000
Crem
M01821_2.00
Mus musculus
NRTKACGTMN
NKACGTMAYN
PBM
Weirauch et al.(2014)
pTH5002
0.857
0.800
Crem
M08845_2.00
Mus musculus
SVVTGACGTSA
TSACGTCABBS
Misc
Kulakovskiy et al.(2013)
CREM_MOUSE.H11MO.0.C
0.857
0.800
Creb1
M00992_2.00
Mus musculus
NNTGACGTCV
BGACGTCANN
PBM
Mann et al.(2013)
CREB1_UM_HK
0.851
0.767
Creb1
M01806_2.00
Mus musculus
VTKACGHNN
NNDCGTMAB
PBM
Weirauch et al.(2014)
pTH5080
0.851
0.767
CREB1
M04264_2.00
Homo sapiens
NVTKACGTMABN
NVTKACGTMABN
SELEX
Yin et al.(2017)
CREB1_FL_HT-SELEX
0.851
0.767
CREB1
M04258_2.00
Homo sapiens
NVTKACGTMANN
NNTKACGTMABN
SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_1
0.851
0.767
CREB1
M04259_2.00
Homo sapiens
NRTGACGTR
YACGTCAYN
SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_2
0.851
0.767
CREB1
M04260_2.00
Homo sapiens
VTSACRYGWBAY
RTVWCRYGTSAB
SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_3
0.851
0.767
CREB1
M04022_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Rodriguez-Martinez et al.(2017)
CREB1.1
0.851
0.767
CREB1
M04023_2.00
Homo sapiens
RTGACGTADB
VHTACGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
CREB1.2
0.851
0.767
CREB1
M08066_2.00
Homo sapiens
NVTGACGTCABN
NVTGACGTCABN
ChIP-seq
Mathelier et al.(2014)
MA0018.3
0.851
0.767
CREB1
M08791_2.00
Homo sapiens
WKRCGTCAYYN
NRRTGACGYMW
Misc
Kulakovskiy et al.(2013)
CREB1_HUMAN.H11MO.0.A
0.851
0.767
Creb1
M08824_2.00
Mus musculus
WKRCGTCAYYN
NRRTGACGYMW
Misc
Kulakovskiy et al.(2013)
CREB1_MOUSE.H11MO.0.A
0.851
0.767
CREB1
M09948_2.00
Homo sapiens
TGACGTMW
WKACGTCA
Transfac
Matys et al.(2006)
V$CREB_01
0.851
0.767
CREB1
M09949_2.00
Homo sapiens
BBGDTGACGYVV
BBRCGTCAHCVV
Transfac
Matys et al.(2006)
V$CREB_02
0.851
0.767
CREB1
M09950_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREB1_Q3
0.851
0.767
CREB1
M09951_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREB1_Q6
0.851
0.767
CREB1
M09952_2.00
Homo sapiens
BSTGACGYARNN
NNYTRCGTCASV
Transfac
Matys et al.(2006)
V$CREB_Q2
0.851
0.767
CREB1
M09953_2.00
Homo sapiens
BSTGACGYMRBV
BVYKRCGTCASV
Transfac
Matys et al.(2006)
V$CREB_Q4
0.851
0.767
CREB1
M09954_2.00
Homo sapiens
KKGGGKTGACGYMND
HNKRCGTCAMCCCMM
Transfac
Matys et al.(2006)
V$TAXCREB_01
0.851
0.767
CREB1
M09955_2.00
Homo sapiens
RTGACGCATAYCCCC
GGGGRTATGCGTCAY
Transfac
Matys et al.(2006)
V$TAXCREB_02
0.851
0.767
Creb1
M00991_2.00
Mus musculus
NNRTGACGYVN
NBRCGTCAYNN
PBM
Mann et al.(2013)
CREB1_M_HK
0.851
0.767
CREB1
M04265_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREB1_FL_Methyl-HT-SELEX
0.851
0.767
CREB1
M04261_2.00
Homo sapiens
BRTGAYGYGND
HNCRCRTCAYV
SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_1
0.851
0.767
CREB1
M04262_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_2
0.851
0.767
CREB1
M04263_2.00
Homo sapiens
NRTGACGYV
BRCGTCAYN
SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_3
0.851
0.767
ATF1
M08792_2.00
Homo sapiens
HBRCGTCAYHN
NDRTGACGYVD
Misc
Kulakovskiy et al.(2013)
ATF1_HUMAN.H11MO.0.B
0.849
0.750
ATF1
M09485_2.00
Homo sapiens
NVTGACGTMA
TKACGTCABN
Misc
Heinz et al.(2010)
K562-ATF1_GSE31477
0.849
0.750
ATF1
M09956_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF1_Q3
0.849
0.750
ATF1
M09957_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF1_Q6_01
0.849
0.750
ATF1
M09958_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF1_Q6
0.849
0.750
Atf1
M00124_2.00
Mus musculus
NNNNDNDNNN
NNNHNHNNNN
PBM
Badis et al.(2009)
Atf1_3026
0.839
0.733
Atf1
M01804_2.00
Mus musculus
RTGACGTV
BACGTCAY
PBM
Weirauch et al.(2014)
pTH5005
0.839
0.733
Atf1
M08820_2.00
Mus musculus
VTGACGTSAV
BTSACGTCAB
Misc
Kulakovskiy et al.(2013)
ATF1_MOUSE.H11MO.0.B
0.839
0.733
CrebB-17A
M03659_2.00
Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY
SELEX
Nitta et al.(2015)
CrebB-17A_1
0.814
0.683
CrebB-17A
M03660_2.00
Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY
SELEX
Nitta et al.(2015)
CrebB-17A_2
0.814
0.683
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000008549
bZIP
288
347
EATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKT
Links
Other
bZIP
family TFs
Other
Monodelphis domestica
TFs
359 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSSTOG00000023146
Ictidomys tridecemlineatus
ENSSTOG00000023146
N
NPAS4
Otolemur garnettii
ENSOGAG00000010446
N
ENSONIG00000005476
Oreochromis niloticus
ENSONIG00000005476
N
NPAS4
Ochotona princeps
ENSOPRG00000008977
N
npas4a
Oryzias latipes
ENSORLG00000001999
N
ENSPANG00000007006
Papio anubis
ENSPANG00000007006
N
ENSPFOG00000009551
Poecilia formosa
ENSPFOG00000009551
N
ENSPPYG00000003026
Pongo abelii
ENSPPYG00000003026
N
NPAS4
Pan troglodytes
ENSPTRG00000003923
N
NPAS4
Pteropus vampyrus
ENSPVAG00000001233
N
Npas4
Rattus norvegicus
ENSRNOG00000020009
N
NPAS4
Sorex araneus
ENSSARG00000003603
N
ENSSHAG00000009488
Sarcophilus harrisii
ENSSHAG00000009488
N
NPAS4
Sus scrofa
ENSSSCG00000012942
N
NPAS4
Oryctolagus cuniculus
ENSOCUG00000000905
N
npas4a
Tetraodon nigroviridis
ENSTNIG00000016823
N
npas4a
Takifugu rubripes
ENSTRUG00000011857
N
ENSTSYG00000001991
Tarsius syrichta
ENSTSYG00000001991
N
NPAS4
Tursiops truncatus
ENSTTRG00000001951
N
ENSXMAG00000013170
Xiphophorus maculatus
ENSXMAG00000013170
N
Alligator_sinensis_CCG003708.1
Alligator sinensis
Alligator_sinensis_CCG003708.1
N
Cmyd_10013223
Chelonia mydas
Cmyd_10013223
N
ENSBTAP00000019870-D1
Bos grunniens
ENSBTAP00000019870-D1
N
ENSP00000311196
Macaca fascicularis
ENSP00000311196
N
Myotis_brandtii_NPAS4_10030769
Myotis brandtii
Myotis_brandtii_NPAS4_10030769
N
Ogr08183
Ophisaurus gracilis
Ogr08183
N
Pvit_07066
Pogona vitticeps
Pvit_07066
N
npas4
Xenopus tropicalis
XB-GENE-993002
N
NPAS4
Homo sapiens
ENSG00000174576
N
ENSAMXG00000008132
Astyanax mexicanus
ENSAMXG00000008132
N
NPAS4
Bos taurus
ENSBTAG00000014925
N
NPAS4
Canis familiaris
ENSCAFG00000012711
N
NPAS4
Callithrix jacchus
ENSCJAG00000001482
N
NPAS4
Cavia porcellus
ENSCPOG00000000685
N
ENSCSAG00000008212
Chlorocebus sabaeus
ENSCSAG00000008212
N
npas4a
Danio rerio
ENSDARG00000055752
N
npas4b
Danio rerio
ENSDARG00000087753
N
NPAS4
Dasypus novemcinctus
ENSDNOG00000042408
N
NPAS4
Equus caballus
ENSECAG00000013683
N
NPAS4
Erinaceus europaeus
ENSEEUG00000004685
N
NPAS4
Echinops telfairi
ENSETEG00000003654
N
NPAS4
Felis catus
ENSFCAG00000009299
N
ENSAMEG00000017065
Ailuropoda melanoleuca
ENSAMEG00000017065
N
npas4a
Gasterosteus aculeatus
ENSGACG00000017076
N
NPAS4
Gorilla gorilla
ENSGGOG00000008608
N
ENSGMOG00000003455
Gadus morhua
ENSGMOG00000003455
N
NPAS4
Loxodonta africana
ENSLAFG00000011138
N
ENSLOCG00000000650
Lepisosteus oculatus
ENSLOCG00000000650
N
ENSMEUG00000004384
Macropus eugenii
ENSMEUG00000004384
N
NPAS4
Microcebus murinus
ENSMICG00000003754
N
NPAS4
Myotis lucifugus
ENSMLUG00000004042
N
NPAS4
Macaca mulatta
ENSMMUG00000015982
N
ENSMPUG00000003040
Mustela putorius furo
ENSMPUG00000003040
N
Npas4
Mus musculus
ENSMUSG00000045903
N
ENSNLEG00000006104
Nomascus leucogenys
ENSNLEG00000006104
N
ENSOARG00000005005
Ovis aries
ENSOARG00000005005
N