CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GB53401
(
Apis mellifera
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
GB53401
T062754_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Atf3
M03648_2.00
Drosophila melanogaster
NRTKACGTMAYN
NRTKACGTMAYN
SELEX
Nitta et al.(2015)
Atf3_1
0.914
0.714
Jdp2
M00125_2.00
Mus musculus
NRTGAYDNNN
NNNHRTCAYN
PBM
Badis et al.(2009)
Jundm2_0911
0.817
0.571
Jdp2
M01810_2.00
Mus musculus
NNTGACGYMW
WKRCGTCANN
PBM
Weirauch et al.(2014)
pTH5464
0.817
0.571
JDP2
M02836_2.00
Homo sapiens
ATGASTCAT
ATGASTCAT
SELEX
Jolma et al.(2013)
JDP2_1
0.817
0.571
JDP2
M02837_2.00
Homo sapiens
NRTGACGTCATB
VATGACGTCAYN
SELEX
Jolma et al.(2013)
JDP2_2
0.817
0.571
JDP2
M02838_2.00
Homo sapiens
ATGASTCAT
ATGASTCAT
SELEX
Jolma et al.(2013)
JDP2_3
0.817
0.571
JDP2
M02839_2.00
Homo sapiens
NRTGACGTCATN
NATGACGTCAYN
SELEX
Jolma et al.(2013)
JDP2_4
0.817
0.571
Jdp2
M02861_2.00
Mus musculus
ATGASTCAT
ATGASTCAT
SELEX
Jolma et al.(2013)
Jdp2_1
0.817
0.571
Jdp2
M02862_2.00
Mus musculus
VATGACGTCAYN
NRTGACGTCATB
SELEX
Jolma et al.(2013)
Jdp2_2
0.817
0.571
JDP2
M04285_2.00
Homo sapiens
NATGASTCATV
BATGASTCATN
SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_1
0.817
0.571
JDP2
M04286_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_2
0.817
0.571
JDP2
M04289_2.00
Homo sapiens
NRTGMSKCAYN
NRTGMSKCAYN
SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_1
0.817
0.571
JDP2
M04290_2.00
Homo sapiens
NRTKACRTMAYN
NRTKAYGTMAYN
SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_2
0.817
0.571
Jdp2
M10033_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$JDP2_03
0.817
0.571
JDP2
M04287_2.00
Homo sapiens
BATGASTCAYN
NRTGASTCATV
SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_1
0.817
0.571
JDP2
M04288_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_2
0.817
0.571
JDP2
M04291_2.00
Homo sapiens
NRTGASTCAYN
NRTGASTCAYN
SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_1
0.817
0.571
JDP2
M04292_2.00
Homo sapiens
NVTKACRTCAYN
NRTGAYGTMABN
SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_2
0.817
0.571
Atf3
M00758_2.00
Mus musculus
NNRTKAYNN
NNRTMAYNN
PBM
Weirauch et al.(2013)
pTH2684
0.796
0.587
Atf3
M01807_2.00
Mus musculus
GATGACGY
RCGTCATC
PBM
Weirauch et al.(2014)
pTH5018
0.796
0.587
Atf3
M08825_2.00
Mus musculus
VTGACTCAB
VTGAGTCAB
Misc
Kulakovskiy et al.(2013)
ATF3_MOUSE.H11MO.0.A
0.796
0.587
Fosl2
M01809_2.00
Mus musculus
GATGACKH
DMGTCATC
PBM
Weirauch et al.(2014)
pTH5108
0.785
0.476
Fosl2
M08828_2.00
Mus musculus
NVTGACTCABN
NVTGAGTCABN
Misc
Kulakovskiy et al.(2013)
FOSL2_MOUSE.H11MO.0.A
0.785
0.476
Fosl2
M09494_2.00
Mus musculus
NNVTGASTCABN
NVTGASTCABNN
Misc
Heinz et al.(2010)
3T3L1-Fosl2_GSE56872
0.785
0.476
FOSB
M04272_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
FOSB_eDBD_HT-SELEX
0.782
0.476
FOSB
M08795_2.00
Homo sapiens
VTGACTCAB
VTGAGTCAB
Misc
Kulakovskiy et al.(2013)
FOSB_HUMAN.H11MO.0.A
0.782
0.476
Fosb
M08814_2.00
Mus musculus
VTGACTCAB
VTGAGTCAB
Misc
Kulakovskiy et al.(2013)
FOSB_MOUSE.H11MO.0.A
0.782
0.476
FOSB
M04273_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
FOSB_eDBD_Methyl-HT-SELEX
0.782
0.476
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GB53401-PA
bZIP
129
191
EDEERRRRRRERNKIAATKCRLKKREKTVTLVHESEILETQNHDLKSQIQELETQRRRLVDML
Links
Other
bZIP
family TFs
Other
Apis mellifera
TFs
307 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA017964
Oryza indica
BGIOSGA017964
N
BGIOSGA017965
Oryza indica
BGIOSGA017965
N
OGLUM05G19230
Oryza glumaepatula
OGLUM05G19230
N
OGLUM05G19240
Oryza glumaepatula
OGLUM05G19240
N
ONIVA05G19090
Oryza nivara
ONIVA05G19090
N
ORUFI05G19330
Oryza rufipogon
ORUFI05G19330
N
ORUFI05G19340
Oryza rufipogon
ORUFI05G19340
N
OS05G0442400
Oryza sativa
OS05G0442400
N