SMAR002779 (Strigamia maritima)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 SMAR002779 T068108_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Pdp1
M03645_2.00 		Drosophila melanogaster
VTTACGTAAB
VTTACGTAAB		 SELEX
Nitta et al.(2015)
Pdp1_1 		0.826 0.714
Pdp1
M03646_2.00 		Drosophila melanogaster
RTTACGTAAY
RTTACGTAAY		 SELEX
Nitta et al.(2015)
Pdp1_2 		0.826 0.714
HLF
M02831_2.00 		Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN		 SELEX
Jolma et al.(2013)
HLF_1 		0.818 0.730
Hlf
M02860_2.00 		Mus musculus
KRTTACGTAAYN
NRTTACGTAAYM		 SELEX
Jolma et al.(2013)
Hlf_1 		0.818 0.730
HLF
M04245_2.00 		Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN		 SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX 		0.818 0.730
HLF
M04016_2.00 		Homo sapiens
RTKAYRTAAB
VTTAYRTMAY		 SELEX
Rodriguez-Martinez et al.(2017)
HLF.1 		0.818 0.730
HLF
M08786_2.00 		Homo sapiens
NRTTRYGTAAYMS
SKRTTACRYAAYN		 Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C 		0.818 0.730
Hlf
M08815_2.00 		Mus musculus
VTTRTGYAABH
DVTTRCAYAAB		 Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C 		0.818 0.730
HLF
M09937_2.00 		Homo sapiens
ATKRYGTAAY
RTTACRYMAT		 Transfac
Matys et al.(2006)
V$HLF_01 		0.818 0.730
HLF
M04246_2.00 		Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN		 SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX 		0.818 0.730
Tef
M01803_2.00 		Mus musculus
NVTTRYVNNN
NNNBRYAABN		 PBM
Weirauch et al.(2014)
pTH5078 		0.783 0.651
TEF
M02849_2.00 		Homo sapiens
NRTTAYGTAAYN
NRTTACRTAAYN		 SELEX
Jolma et al.(2013)
TEF_1 		0.783 0.651
TEF
M02850_2.00 		Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN		 SELEX
Jolma et al.(2013)
TEF_2 		0.783 0.651
TEF
M04325_2.00 		Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN		 SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX 		0.783 0.651
TEF
M09983_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_05 		0.783 0.651
TEF
M09984_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_06 		0.783 0.651
TEF
M09985_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_Q6 		0.783 0.651
TEF
M09986_2.00 		Homo sapiens
MTKAYGTAAY
RTTACRTMAK		 Transfac
Matys et al.(2006)
V$VBP_01 		0.783 0.651
TEF
M04326_2.00 		Homo sapiens
NRTTACRTAAYN
NRTTAYGTAAYN		 SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX 		0.783 0.651
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMAR002779-PA bZIP 240 302

Links

Other bZIP family TFs
Other Strigamia maritima TFs

201 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa007561mg Prunus persica PRUPE_ppa007561mg I
Lus10019247.g Linum usitatissimum Lus10019247.g I
Lus10011578.g Linum usitatissimum Lus10011578.g I
Pm002304 Prunus mume Pm002304 I
TRIUR3_26880 Triticum urartu TRIUR3_26880 I
Traes_4DS_7F3D9E4D9 Triticum aestivum Traes_4DS_7F3D9E4D9 I
Traes_4BS_34AF89ACE Triticum aestivum Traes_4BS_34AF89ACE I
Traes_4AL_F3571097B Triticum aestivum Traes_4AL_F3571097B I
BRADI1G10170 Brachypodium distachyon BRADI1G10170 I
F775_11371 Aegilops tauschii F775_11371 I
MLOC_64735 Hordeum vulgare MLOC_64735 I
Sb08g020300 Sorghum bicolor Sb08g020300 N
GRMZM2G018472 Zea mays GRMZM2G018472 N
GRMZM2G165090 Zea mays GRMZM2G165090 N
OBART12G17960 Oryza barthii OBART12G17960 N
OBART12G18000 Oryza barthii OBART12G18000 N
Si024958m.g Setaria italica Si024958m.g N
Si024602m.g Setaria italica Si024602m.g N
Sb08g020320 Sorghum bicolor Sb08g020320 N
OGLUM12G19510 Oryza glumaepatula OGLUM12G19510 N
Sb08g020290 Sorghum bicolor Sb08g020290 N
Sb08g020280 Sorghum bicolor Sb08g020280 N
Sb08g020275 Sorghum bicolor Sb08g020275 N
BGIOSGA037734 Oryza indica BGIOSGA037734 N
ORUFI12G19910 Oryza rufipogon ORUFI12G19910 N
ORUFI12G19880 Oryza rufipogon ORUFI12G19880 N
OPUNC12G16280 Oryza punctata OPUNC12G16280 N
ONIVA12G16610 Oryza nivara ONIVA12G16610 N
ONIVA12G16580 Oryza nivara ONIVA12G16580 N