Alligator_sinensis_CCG003733.1 (Alligator sinensis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Alligator_sinensis_CCG003733.1 T069840_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATF1
M08792_2.00 		Homo sapiens
HBRCGTCAYHN
NDRTGACGYVD		 Misc
Kulakovskiy et al.(2013)
ATF1_HUMAN.H11MO.0.B 		0.906 0.967
ATF1
M09485_2.00 		Homo sapiens
NVTGACGTMA
TKACGTCABN		 Misc
Heinz et al.(2010)
K562-ATF1_GSE31477 		0.906 0.967
ATF1
M09956_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF1_Q3 		0.906 0.967
ATF1
M09957_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF1_Q6_01 		0.906 0.967
ATF1
M09958_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF1_Q6 		0.906 0.967
Atf1
M00124_2.00 		Mus musculus
NNNNDNDNNN
NNNHNHNNNN		 PBM
Badis et al.(2009)
Atf1_3026 		0.896 0.967
Atf1
M01804_2.00 		Mus musculus
RTGACGTV
BACGTCAY		 PBM
Weirauch et al.(2014)
pTH5005 		0.896 0.967
Atf1
M08820_2.00 		Mus musculus
VTGACGTSAV
BTSACGTCAB		 Misc
Kulakovskiy et al.(2013)
ATF1_MOUSE.H11MO.0.B 		0.896 0.967
Creb1
M00992_2.00 		Mus musculus
NNTGACGTCV
BGACGTCANN		 PBM
Mann et al.(2013)
CREB1_UM_HK 		0.894 0.900
Creb1
M01806_2.00 		Mus musculus
VTKACGHNN
NNDCGTMAB		 PBM
Weirauch et al.(2014)
pTH5080 		0.894 0.900
CREB1
M04264_2.00 		Homo sapiens
NVTKACGTMABN
NVTKACGTMABN		 SELEX
Yin et al.(2017)
CREB1_FL_HT-SELEX 		0.894 0.900
CREB1
M04258_2.00 		Homo sapiens
NVTKACGTMANN
NNTKACGTMABN		 SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_1 		0.894 0.900
CREB1
M04259_2.00 		Homo sapiens
NRTGACGTR
YACGTCAYN		 SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_2 		0.894 0.900
CREB1
M04260_2.00 		Homo sapiens
VTSACRYGWBAY
RTVWCRYGTSAB		 SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_3 		0.894 0.900
CREB1
M04022_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Rodriguez-Martinez et al.(2017)
CREB1.1 		0.894 0.900
CREB1
M04023_2.00 		Homo sapiens
RTGACGTADB
VHTACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
CREB1.2 		0.894 0.900
CREB1
M08066_2.00 		Homo sapiens
NVTGACGTCABN
NVTGACGTCABN		 ChIP-seq
Mathelier et al.(2014)
MA0018.3 		0.894 0.900
CREB1
M08791_2.00 		Homo sapiens
WKRCGTCAYYN
NRRTGACGYMW		 Misc
Kulakovskiy et al.(2013)
CREB1_HUMAN.H11MO.0.A 		0.894 0.900
Creb1
M08824_2.00 		Mus musculus
WKRCGTCAYYN
NRRTGACGYMW		 Misc
Kulakovskiy et al.(2013)
CREB1_MOUSE.H11MO.0.A 		0.894 0.900
CREB1
M09948_2.00 		Homo sapiens
TGACGTMW
WKACGTCA		 Transfac
Matys et al.(2006)
V$CREB_01 		0.894 0.900
CREB1
M09949_2.00 		Homo sapiens
BBGDTGACGYVV
BBRCGTCAHCVV		 Transfac
Matys et al.(2006)
V$CREB_02 		0.894 0.900
CREB1
M09950_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREB1_Q3 		0.894 0.900
CREB1
M09951_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREB1_Q6 		0.894 0.900
CREB1
M09952_2.00 		Homo sapiens
BSTGACGYARNN
NNYTRCGTCASV		 Transfac
Matys et al.(2006)
V$CREB_Q2 		0.894 0.900
CREB1
M09953_2.00 		Homo sapiens
BSTGACGYMRBV
BVYKRCGTCASV		 Transfac
Matys et al.(2006)
V$CREB_Q4 		0.894 0.900
CREB1
M09954_2.00 		Homo sapiens
KKGGGKTGACGYMND
HNKRCGTCAMCCCMM		 Transfac
Matys et al.(2006)
V$TAXCREB_01 		0.894 0.900
CREB1
M09955_2.00 		Homo sapiens
RTGACGCATAYCCCC
GGGGRTATGCGTCAY		 Transfac
Matys et al.(2006)
V$TAXCREB_02 		0.894 0.900
Creb1
M00991_2.00 		Mus musculus
NNRTGACGYVN
NBRCGTCAYNN		 PBM
Mann et al.(2013)
CREB1_M_HK 		0.894 0.900
CREB1
M04265_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
CREB1_FL_Methyl-HT-SELEX 		0.894 0.900
CREB1
M04261_2.00 		Homo sapiens
BRTGAYGYGND
HNCRCRTCAYV		 SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_1 		0.894 0.900
CREB1
M04262_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_2 		0.894 0.900
CREB1
M04263_2.00 		Homo sapiens
NRTGACGYV
BRCGTCAYN		 SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_3 		0.894 0.900
Crem
M01821_2.00 		Mus musculus
NRTKACGTMN
NKACGTMAYN		 PBM
Weirauch et al.(2014)
pTH5002 		0.880 0.883
Crem
M08845_2.00 		Mus musculus
SVVTGACGTSA
TSACGTCABBS		 Misc
Kulakovskiy et al.(2013)
CREM_MOUSE.H11MO.0.C 		0.880 0.883
CREM
M04229_2.00 		Homo sapiens
VVTBACGTVABN
NVTBACGTVABB		 SELEX
Yin et al.(2017)
CREM_eDBD_HT-SELEX 		0.849 0.733
CREM
M08784_2.00 		Homo sapiens
SVVTGACGTSA
TSACGTCABBS		 Misc
Kulakovskiy et al.(2013)
CREM_HUMAN.H11MO.0.C 		0.849 0.733
CREM
M09930_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREM_Q6_01 		0.849 0.733
CREM
M09931_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREM_Q6 		0.849 0.733
CREM
M04230_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
CREM_eDBD_Methyl-HT-SELEX 		0.849 0.733
CrebB-17A
M03659_2.00 		Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY		 SELEX
Nitta et al.(2015)
CrebB-17A_1 		0.817 0.817
CrebB-17A
M03660_2.00 		Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY		 SELEX
Nitta et al.(2015)
CrebB-17A_2 		0.817 0.817
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG003733.1 bZIP 353 412

Links

Other bZIP family TFs
Other Alligator sinensis TFs

360 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PDIP_83900 Penicillium digitatum PDIP_83900 N 0.000
PV08_04239 Exophiala spinifera PV08_04239 N 0.000
PV07_03969 Cladophialophora immunda PV07_03969 N 0.000
PV06_00365 Exophiala oligosperma PV06_00365 N 0.000
PV05_05003 Exophiala xenobiotica PV05_05003 N 0.000
PV04_06122 Capronia semiimmersa PV04_06122 N 0.000
PTT_11410 Pyrenophora teres PTT_11410 N 0.000
PTRG_05162 Pyrenophora triticirepentis PTRG_05162 N 0.000
PMAA_050990 Talaromyces marneffei PMAA_050990 N 0.000
PITC_046280 Penicillium italicum PITC_046280 N 0.000
PEX1_072030 Penicillium expansum PEX1_072030 N 0.000
PV10_07750 Exophiala mesophila PV10_07750 N 0.000
PDE_03008 Penicillium oxalicum PDE_03008 N 0.000
PCH_Pc13g03170 Penicillium rubens PCH_Pc13g03170 N 0.000
PABG_06170 Paracoccidioides brasiliensis PABG_06170 N 0.000
PAAG_05598 Paracoccidioides sp lutzii PAAG_05598 N 0.000
MYCFIDRAFT_39346 Pseudocercospora fijiensis MYCFIDRAFT_39346 N 0.000
MGYG_06020 Microsporum gypseum MGYG_06020 N 0.000
MCYG_05945 Arthroderma otae MCYG_05945 N 0.000
M438DRAFT_97521 Aureobasidium pullulans M438DRAFT_97521 N 0.000
M437DRAFT_83846 Aureobasidium melanogenum M437DRAFT_83846 N 0.000
HMPREF1541_08408 Cyphellophora europaea HMPREF1541_08408 N 0.000
VDAG_04562 Verticillium dahliae VDAG_04562 N 0.000
PMAA_050990 Penicillium marneffei PMAA_050990 N 0.000
Pc13g03170 Penicillium chrysogenum Pc13g03170 N 0.000
fgenesh1_pm.00129_#_356 Aspergillus carbonarius fgenesh1_pm.00129_#_356 N 0.000
AB06078.1 Alternaria brassicicola AB06078.1 N 0.000
estExt_fgenesh1_pm.C_250032 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_250032 N 0.000
e_gw1.14.414.1 Mycosphaerella fijiensis e_gw1.14.414.1 N 0.000
Z519_04250 Cladophialophora bantiana Z519_04250 N 0.000
Z518_09578 Rhinocladiella mackenziei Z518_09578 N 0.000
Z517_00692 Fonsecaea pedrosoi Z517_00692 N 0.000
VDBG_09326 Verticillium alfalfae VDBG_09326 N 0.000
HMPREF1120_08485 Exophiala dermatitidis HMPREF1120_08485 N 0.000
UREG_06714 Uncinocarpus reesii UREG_06714 N 0.000
U727_00430300601 Penicillium solitum U727_00430300601 N 0.000
TSTA_021880 Talaromyces stipitatus TSTA_021880 N 0.000
TRV_02801 Trichophyton verrucosum TRV_02801 N 0.000
TESG_07658 Trichophyton tonsurans TESG_07658 N 0.000
TEQG_04364 Trichophyton equinum TEQG_04364 N 0.000
SNOG_13398 Phaeosphaeria nodorum SNOG_13398 N 0.000
SETTUDRAFT_150444 Setosphaeria turcica SETTUDRAFT_150444 N 0.000
PVAR5_1147 Byssochlamys spectabilis PVAR5_1147 N 0.000
AUEXF2481DRAFT_27191 Aureobasidium subglaciale AUEXF2481DRAFT_27191 N 0.000
CFIO01_13194 Colletotrichum fioriniae CFIO01_13194 N 0.000
NFIA_021310 Neosartorya fischeri CADNFIAG00000827 N 0.000
ATEG_02532 Aspergillus terreus CADATEAG00003645 N 0.000
CADAORAG00002728 Aspergillus oryzae CADAORAG00002728 N 0.000
flbD Aspergillus nidulans CADANIAG00002443 N 0.000
CADANGAG00000476 Aspergillus niger CADANGAG00000476 N 0.000
AFUA_1G03210 Aspergillus fumigatus CADAFUAG00009239 N 0.000
CADAFLAG00000799 Aspergillus flavus CADAFLAG00000799 N 0.000
BBA_07259 Beauveria bassiana BBA_07259 N 0.000
BAUCODRAFT_34049 Baudoinia compniacensis BAUCODRAFT_34049 N 0.000
CGGC5_975 Colletotrichum gloeosporioides CGGC5_975 N 0.000
ARB_04542 Arthroderma benhamiae ARB_04542 N 0.000
A1O9_04250 Exophiala aquamarina A1O9_04250 N 0.000
A1O7_05748 Cladophialophora yegresii A1O7_05748 N 0.000
A1O5_10088 Cladophialophora psammophila A1O5_10088 N 0.000
A1O3_01321 Capronia epimyces A1O3_01321 N 0.000
A1O1_04095 Capronia coronata A1O1_04095 N 0.000
VDBG_09326 Verticillium albo atrum VDBG_09326 N 0.000
SNOG_13398 Stagonospora nodorum SNOG_13398 N 0.000
MCYG_05945 Microsporum canis MCYG_05945 N 0.000
DOTSEDRAFT_69606 Dothistroma septosporum DOTSEDRAFT_69606 N 0.000
HCBG_00682 Histoplasma capsulatum HCBG_00682 N 0.000
H105_02417 Trichophyton soudanense H105_02417 N 0.000
H102_02396 Trichophyton rubrum H102_02396 N 0.000
H101_07912 Trichophyton interdigitale H101_07912 N 0.000
GSTUM_00009849001 Tuber melanosporum GSTUM_00009849001 N 0.000
GMDG_02112 Pseudogymnoascus destructans GMDG_02112 N 0.000
GLRG_01306 Colletotrichum graminicola GLRG_01306 N 0.000
G647_06777 Cladophialophora carrionii G647_06777 N 0.000
EURHEDRAFT_404004 Aspergillus ruber EURHEDRAFT_404004 N 0.000
EPUS_03928 Endocarpon pusillum EPUS_03928 N 0.000
CIMG_04804 Coccidioides immitis CIMG_04804 N 0.000
CSUB01_05390 Colletotrichum sublineola CSUB01_05390 N 0.000
CPC735_070400 Coccidioides posadasii CPC735_070400 N 0.000
COCVIDRAFT_99762 Bipolaris victoriae COCVIDRAFT_99762 N 0.000
COCSADRAFT_221816 Bipolaris sorokiniana COCSADRAFT_221816 N 0.000
COCMIDRAFT_25841 Bipolaris oryzae COCMIDRAFT_25841 N 0.000
COCCADRAFT_88089 Bipolaris zeicola COCCADRAFT_88089 N 0.000
COCC4DRAFT_54097 Bipolaris maydis COCC4DRAFT_54097 N 0.000
Cob_01758 Colletotrichum orbiculare Cob_01758 N 0.000
CH063_12954 Colletotrichum higginsianum CH063_12954 N 0.000