Alligator_sinensis_CCG010200.1 (Alligator sinensis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Alligator_sinensis_CCG010200.1 T069860_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFE2L3
M09923_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NRF3_02 		0.896 0.794
Nfe2l3
M10031_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NRF3_01 		0.876 0.762
NFE2L1
M04008_2.00 		Homo sapiens
RTGACTCAY
RTGAGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
NFE2L1.1 		0.860 0.667
NFE2L1
M08782_2.00 		Homo sapiens
NATGAYD
HRTCATN		 Misc
Kulakovskiy et al.(2013)
NF2L1_HUMAN.H11MO.0.C 		0.860 0.667
Nfe2l1
M08831_2.00 		Mus musculus
NATGAYD
HRTCATN		 Misc
Kulakovskiy et al.(2013)
NF2L1_MOUSE.H11MO.0.C 		0.860 0.667
NFE2L1
M09925_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFE2L1_Q5 		0.860 0.667
NFE2L1
M09926_2.00 		Homo sapiens
NNNNHWNNATGAC
GTCATNNWDNNNN		 Transfac
Matys et al.(2006)
V$TCF11_01 		0.860 0.667
Nfe2l2
M08077_2.00 		Mus musculus
NRNNRTGACTCAGCA
TGCTGAGTCAYNNYN		 ChIP-seq
Mathelier et al.(2014)
MA0150.2 		0.840 0.524
Nfe2l2
M08816_2.00 		Mus musculus
RTGACTNAGCANDH
DHNTGCTNAGTCAY		 Misc
Kulakovskiy et al.(2013)
NF2L2_MOUSE.H11MO.0.A 		0.840 0.524
NFE2L2
M08789_2.00 		Homo sapiens
RTGACTCAGCANWW
WWNTGCTGAGTCAY		 Misc
Kulakovskiy et al.(2013)
NF2L2_HUMAN.H11MO.0.A 		0.839 0.587
NFE2L2
M09943_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NRF2_Q3 		0.839 0.587
NFE2L2
M09944_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NRF2_Q4_01 		0.839 0.587
NFE2L2
M09945_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NRF2_Q4 		0.839 0.587
NFE2L2
M09946_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NRF2_Q6 		0.839 0.587
NFE2L2
M01142_2.00 		Gallus gallus
NNRTKAYNN
NNRTMAYNN		 PBM
Lambert et al.(2019)
pTH9845 		0.838 0.571
Nfe2
M08843_2.00 		Mus musculus
RTGACTCAGCANDW
WHNTGCTGAGTCAY		 Misc
Kulakovskiy et al.(2013)
NFE2_MOUSE.H11MO.0.A 		0.827 0.492
NFE2
M02832_2.00 		Homo sapiens
VATGACTCATB
VATGAGTCATB		 SELEX
Jolma et al.(2013)
NFE2_1 		0.823 0.492
NFE2
M04266_2.00 		Homo sapiens
VRTGASTCAYB
VRTGASTCAYB		 SELEX
Yin et al.(2017)
NFE2_eDBD_HT-SELEX 		0.823 0.492
NFE2
M04024_2.00 		Homo sapiens
RTGACTCAY
RTGAGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
NFE2.1 		0.823 0.492
NFE2
M07813_2.00 		Homo sapiens
VRTGACTCAGCANWWHB
VDWWNTGCTGAGTCAYB		 ChIP-seq
Gerstein et al.(2012)
K562_NFE2_Stanford 		0.823 0.492
NFE2
M08793_2.00 		Homo sapiens
VVRTGACTCAGCA
TGCTGAGTCAYBB		 Misc
Kulakovskiy et al.(2013)
NFE2_HUMAN.H11MO.0.A 		0.823 0.492
NFE2
M09486_2.00 		Homo sapiens
VATGACTCAGCA
TGCTGAGTCATB		 Misc
Heinz et al.(2010)
K562-NFE2_GSE31477 		0.823 0.492
NFE2
M09959_2.00 		Homo sapiens
RTGASTCAGCD
HGCTGASTCAY		 Transfac
Matys et al.(2006)
V$NFE2_01 		0.823 0.492
NFE2
M09960_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFE2_04 		0.823 0.492
NFE2
M09961_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFE2_Q6 		0.823 0.492
NFE2
M04267_2.00 		Homo sapiens
NRTGASTCAYN
NRTGASTCAYN		 SELEX
Yin et al.(2017)
NFE2_eDBD_Methyl-HT-SELEX 		0.823 0.492
FBgn0262975
M03654_2.00 		Drosophila melanogaster
NYGTCAYSRTGACRN
NYGTCAYSRTGACRN		 SELEX
Nitta et al.(2015)
cnc_1 		0.816 0.540
FBgn0262975
M03655_2.00 		Drosophila melanogaster
SATGACRNVVATGACD
HGTCATBBNYGTCATS		 SELEX
Nitta et al.(2015)
cnc_2 		0.816 0.540
FBgn0262975
M03656_2.00 		Drosophila melanogaster
GTCAKSATGACGTCAY
RTGACGTCATSMTGAC		 SELEX
Nitta et al.(2015)
cnc_3 		0.816 0.540
FBgn0262975
M08189_2.00 		Drosophila melanogaster
TGAYTBDGCA
TGCHVARTCA		 ChIP-seq
Contrino et al.(2012)
Mf3 		0.816 0.540
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG010200.1 bZIP 397 459

Links

Other bZIP family TFs
Other Alligator sinensis TFs

343 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10003889.g Linum usitatissimum Lus10003889.g I
Aquca_037_00132 Aquilegia coerulea Aquca_037_00132 I
Bostr.29223s0053 Boechera stricta Bostr.29223s0053 I
Cagra.0062s0002 Capsella grandiflora Cagra.0062s0002 I
Carubv10020622m.g Capsella rubella Carubv10020622m.g I
Ciclev10021265m.g Citrus clementina Ciclev10021265m.g I
Eucgr.E00857 Eucalyptus grandis Eucgr.E00857 I
evm.TU.supercontig_79.43 Carica papaya evm.TU.supercontig_79.43 I
gene32084-v1.0-hybrid Fragaria vesca gene32084-v1.0-hybrid I
Lus10001898.g Linum usitatissimum Lus10001898.g I
mgf021167m Mimulus guttatus mgf021167m I
MDP0000292965 Malus domestica MDP0000292965 I
MDP0000861708 Malus domestica MDP0000861708 I
orange1.1g045091m.g Citrus sinensis orange1.1g045091m.g I
SapurV1A.0035s0570 Salix purpurea SapurV1A.0035s0570 I
SapurV1A.0237s0310 Salix purpurea SapurV1A.0237s0310 I
Thhalv10023588m.g Eutrema salsugineum Thhalv10023588m.g I
PK09586.1 Cannabis sativa PK09586.1 I
chr2.CM0060.390.nc Lotus japonicus chr2.CM0060.390.nc I
POPTR_0001s10540 Populus trichocarpa POPTR_0001s10540 I
Bo9g030900 Brassica oleracea Bo9g030900 I
Bra027697 Brassica rapa Bra027697 I
fgenesh2_kg.2__42__AT1G64380.1 Arabidopsis lyrata fgenesh2_kg.2__42__AT1G64380.1 I
GLYMA01G43450 Glycine max GLYMA01G43450 I
GLYMA11G02050 Glycine max GLYMA11G02050 I
MTR_5g009410 Medicago truncatula MTR_5g009410 I
PGSC0003DMG400005837 Solanum tuberosum PGSC0003DMG400005837 I
PGSC0003DMG400012154 Solanum tuberosum PGSC0003DMG400012154 I
ERF061 Arabidopsis thaliana AT1G64380 I
POPTR_0003s13910 Populus trichocarpa POPTR_0003s13910 I
PRUPE_ppa009005mg Prunus persica PRUPE_ppa009005mg I
Solyc08g082210.2 Solanum lycopersicum Solyc08g082210.2 I
VIT_02s0025g01360 Vitis vinifera VIT_02s0025g01360 I
Cla011093 Citrullus lanatus Cla011093 I
Pm024053 Prunus mume Pm024053 I
30190.m010825 Ricinus communis 30190.m010825 I
cassava42814.valid.m1 Manihot esculenta cassava42814.valid.m1 I