Cflo_01516--XP_394681.2_APIME (Camponotus floridanus)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Cflo_01516--XP_394681.2_APIME T069972_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CEBPB
M02851_2.00 		Homo sapiens
VTTRCGCAAY
RTTGCGYAAB		 SELEX
Jolma et al.(2013)
CEBPB_1 		0.815 0.597
CEBPB
M02852_2.00 		Homo sapiens
VTTRCGCAAY
RTTGCGYAAB		 SELEX
Jolma et al.(2013)
CEBPB_2 		0.815 0.597
CEBPB
M04331_2.00 		Homo sapiens
NVTTRCGCAAYN
NRTTGCGYAABN		 SELEX
Yin et al.(2017)
CEBPB_eDBD_HT-SELEX 		0.815 0.597
CEBPB
M05840_2.00 		Homo sapiens
RTTRCGYAAYM
KRTTRCGYAAY		 SMiLE-seq
Isakova et al.(2017)
CEBPb 		0.815 0.597
CEBPB
M07830_2.00 		Homo sapiens
NNDRTKDYGCAAYN
NRTTGCRHMAYHNN		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_CEBPB_Stanford 		0.815 0.597
CEBPB
M07831_2.00 		Homo sapiens
RTKRYGCAAYV
BRTTGCRYMAY		 ChIP-seq
Gerstein et al.(2012)
HepG2_CEBPB_Stanford 		0.815 0.597
CEBPB
M07832_2.00 		Homo sapiens
DRTKRYGCAAYVNN
NNBRTTGCRYMAYH		 ChIP-seq
Gerstein et al.(2012)
K562_CEBPB_Stanford 		0.815 0.597
CEBPB
M08804_2.00 		Homo sapiens
DRTKDHGCAAYV
BRTTGCDHMAYH		 Misc
Kulakovskiy et al.(2013)
CEBPB_HUMAN.H11MO.0.A 		0.815 0.597
CEBPB
M09993_2.00 		Homo sapiens
RNRTKDDGHAAKNN
NNMTTDCHHMAYNY		 Transfac
Matys et al.(2006)
V$CEBPB_01 		0.815 0.597
CEBPB
M09994_2.00 		Homo sapiens
NDRTKDHGCAABMH
DKVTTGCDHMAYHN		 Transfac
Matys et al.(2006)
V$CEBPB_02 		0.815 0.597
CEBPB
M09995_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CEBPB_04 		0.815 0.597
CEBPB
M09996_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CEBPB_07 		0.815 0.597
CEBPB
M09997_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CEBPB_Q3 		0.815 0.597
CEBPB
M09998_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CEBPB_Q6 		0.815 0.597
CEBPB
M04332_2.00 		Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN		 SELEX
Yin et al.(2017)
CEBPB_eDBD_Methyl-HT-SELEX 		0.815 0.597
Cebpb
M02636_2.00 		Mus musculus
VTKDYGYAAB
VTTRCRHMAB		 PBM
Tillo et al.(2017)
CEBPB_C 		0.807 0.581
Cebpb
M00999_2.00 		Mus musculus
VTKDYGYAAB
VTTRCRHMAB		 PBM
Mann et al.(2013)
CEBPB_UM_HK 		0.807 0.581
Cebpb
M00761_2.00 		Mus musculus
NTKDHGHAAB
VTTDCDHMAN		 PBM
Weirauch et al.(2013)
pTH3208 		0.807 0.581
Cebpb
M01818_2.00 		Mus musculus
VTKDYGYAAB
VTTRCRHMAB		 PBM
Weirauch et al.(2014)
pTH5460 		0.807 0.581
Cebpb
M02867_2.00 		Mus musculus
VTTRCGCAAY
RTTGCGYAAB		 SELEX
Jolma et al.(2013)
Cebpb_1 		0.807 0.581
Cebpb
M08841_2.00 		Mus musculus
DRTKDHGCAAB
VTTGCDHMAYH		 Misc
Kulakovskiy et al.(2013)
CEBPB_MOUSE.H11MO.0.A 		0.807 0.581
Cebpb
M09498_2.00 		Mus musculus
GTTGYRCAAT
ATTGYRCAAC		 Misc
Heinz et al.(2010)
ThioMac-CEBPb_GSE21512 		0.807 0.581
Cebpb
M02633_2.00 		Mus musculus
VTKDNGHAAB
VTTDCNHMAB		 PBM
Tillo et al.(2017)
CEBPB_5hmC 		0.807 0.581
Cebpb
M02634_2.00 		Mus musculus
TKDYGYAAYN
NRTTRCRHMA		 PBM
Tillo et al.(2017)
CEBPB_5mCG 		0.807 0.581
Cebpb
M02635_2.00 		Mus musculus
YKDYGHAAYN
NRTTDCRHMR		 PBM
Tillo et al.(2017)
CEBPB_5mC 		0.807 0.581
Cebpb
M00998_2.00 		Mus musculus
NTTDCGCAA
TTGCGHAAN		 PBM
Mann et al.(2013)
CEBPB_M_HK 		0.807 0.581
CEBPE
M02824_2.00 		Homo sapiens
VTTRCGCAAY
RTTGCGYAAB		 SELEX
Jolma et al.(2013)
CEBPE_1 		0.791 0.597
CEBPE
M02729_2.00 		Homo sapiens
VTTDYRHAAY
RTTDYRHAAB		 SELEX
Jolma et al.(2010)
CEBPE_dimer 		0.791 0.597
CEBPE
M04227_2.00 		Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN		 SELEX
Yin et al.(2017)
CEBPE_eDBD_HT-SELEX 		0.791 0.597
CEBPE
M04009_2.00 		Homo sapiens
NVTKRYRCAABN
NVTTGYRYMABN		 SELEX
Rodriguez-Martinez et al.(2017)
CEBPE.1 		0.791 0.597
CEBPE
M08783_2.00 		Homo sapiens
VHDATTDCVHAM
KTDBGHAATHDB		 Misc
Kulakovskiy et al.(2013)
CEBPE_HUMAN.H11MO.0.A 		0.791 0.597
CEBPE
M09927_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CEBPE_01 		0.791 0.597
CEBPE
M09928_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CEBPE_Q6_01 		0.791 0.597
CEBPE
M09929_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CEBPE_Q6 		0.791 0.597
CEBPE
M04228_2.00 		Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN		 SELEX
Yin et al.(2017)
CEBPE_eDBD_Methyl-HT-SELEX 		0.791 0.597
Cebpe
M01815_2.00 		Mus musculus
TKDYGCAA
TTGCRHMA		 PBM
Weirauch et al.(2014)
pTH5253 		0.790 0.581
Cebpe
M08836_2.00 		Mus musculus
VHDATTDCVHAM
KTDBGHAATHDB		 Misc
Kulakovskiy et al.(2013)
CEBPE_MOUSE.H11MO.0.A 		0.790 0.581
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cflo_01516--XP_394681.2_APIME bZIP 260 321

Links

Other bZIP family TFs
Other Camponotus floridanus TFs

106 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANAC050 Arabidopsis thaliana AT3G10480 D
gene23561-v1.0-hybrid Fragaria vesca gene23561-v1.0-hybrid I
Bostr.22252s0012 Boechera stricta Bostr.22252s0012 I
Cagra.0834s0028 Capsella grandiflora Cagra.0834s0028 I
Cagra.0834s0029 Capsella grandiflora Cagra.0834s0029 I
Cagra.9217s0020 Capsella grandiflora Cagra.9217s0020 I
Carubv10013564m.g Capsella rubella Carubv10013564m.g I
Carubv10013694m.g Capsella rubella Carubv10013694m.g I
Ciclev10031606m.g Citrus clementina Ciclev10031606m.g I
Bostr.22252s0011 Boechera stricta Bostr.22252s0011 I
Gorai.009G309300 Gossypium raimondii Gorai.009G309300 I
Gorai.012G007000 Gossypium raimondii Gorai.012G007000 I
Lus10037939.g Linum usitatissimum Lus10037939.g I
Lus10038670.g Linum usitatissimum Lus10038670.g I
orange1.1g014130m.g Citrus sinensis orange1.1g014130m.g I
SapurV1A.0213s0310 Salix purpurea SapurV1A.0213s0310 I
Thhalv10020717m.g Eutrema salsugineum Thhalv10020717m.g I
Thhalv10020745m.g Eutrema salsugineum Thhalv10020745m.g I
cassava22912.valid.m1 Manihot esculenta cassava22912.valid.m1 I
TCM_043357 Theobroma cacao TCM_043357 I
POPTR_0010s23630 Populus trichocarpa POPTR_0010s23630 I
GRMZM2G125777 Zea mays GRMZM2G125777 I
ANAC052 Arabidopsis lyrata fgenesh2_kg.3__1083__AT3G10490.2 I
ANAC050 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000864 I
Bra034119 Brassica rapa Bra034119 I
Bra034118 Brassica rapa Bra034118 I
Bra029844 Brassica rapa Bra029844 I
Bra001366 Brassica rapa Bra001366 I
Bra001365 Brassica rapa Bra001365 I
Bo5g137360 Brassica oleracea Bo5g137360 I
Bo3g062710 Brassica oleracea Bo3g062710 I
Bo1g143850 Brassica oleracea Bo1g143850 I
Bo1g143840 Brassica oleracea Bo1g143840 I
ANAC052 Arabidopsis thaliana AT3G10490 I