Pvit_00680 (Pogona vitticeps)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pvit_00680 T070401_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HLF
M02831_2.00 		Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN		 SELEX
Jolma et al.(2013)
HLF_1 		0.893 0.952
Hlf
M02860_2.00 		Mus musculus
KRTTACGTAAYN
NRTTACGTAAYM		 SELEX
Jolma et al.(2013)
Hlf_1 		0.893 0.952
HLF
M04245_2.00 		Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN		 SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX 		0.893 0.952
HLF
M04016_2.00 		Homo sapiens
RTKAYRTAAB
VTTAYRTMAY		 SELEX
Rodriguez-Martinez et al.(2017)
HLF.1 		0.893 0.952
HLF
M08786_2.00 		Homo sapiens
NRTTRYGTAAYMS
SKRTTACRYAAYN		 Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C 		0.893 0.952
Hlf
M08815_2.00 		Mus musculus
VTTRTGYAABH
DVTTRCAYAAB		 Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C 		0.893 0.952
HLF
M09937_2.00 		Homo sapiens
ATKRYGTAAY
RTTACRYMAT		 Transfac
Matys et al.(2006)
V$HLF_01 		0.893 0.952
HLF
M04246_2.00 		Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN		 SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX 		0.893 0.952
Tef
M01803_2.00 		Mus musculus
NVTTRYVNNN
NNNBRYAABN		 PBM
Weirauch et al.(2014)
pTH5078 		0.844 0.794
TEF
M02849_2.00 		Homo sapiens
NRTTAYGTAAYN
NRTTACRTAAYN		 SELEX
Jolma et al.(2013)
TEF_1 		0.844 0.794
TEF
M02850_2.00 		Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN		 SELEX
Jolma et al.(2013)
TEF_2 		0.844 0.794
TEF
M04325_2.00 		Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN		 SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX 		0.844 0.794
TEF
M09983_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_05 		0.844 0.794
TEF
M09984_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_06 		0.844 0.794
TEF
M09985_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_Q6 		0.844 0.794
TEF
M09986_2.00 		Homo sapiens
MTKAYGTAAY
RTTACRTMAK		 Transfac
Matys et al.(2006)
V$VBP_01 		0.844 0.794
TEF
M04326_2.00 		Homo sapiens
NRTTACRTAAYN
NRTTAYGTAAYN		 SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX 		0.844 0.794
Pdp1
M03645_2.00 		Drosophila melanogaster
VTTACGTAAB
VTTACGTAAB		 SELEX
Nitta et al.(2015)
Pdp1_1 		0.795 0.698
Pdp1
M03646_2.00 		Drosophila melanogaster
RTTACGTAAY
RTTACGTAAY		 SELEX
Nitta et al.(2015)
Pdp1_2 		0.795 0.698
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_00680 bZIP 220 282

Links

Other bZIP family TFs
Other Pogona vitticeps TFs

231 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00129p00111730 Amborella trichopoda AMTR_s00129p00111730 N
ARID4 Arabidopsis thaliana AT3G43240 N
BGIOSGA026888 Oryza indica BGIOSGA026888 N
BGIOSGA029700 Oryza indica BGIOSGA029700 N
Bo3g127310 Brassica oleracea Bo3g127310 N
Bra034957 Brassica rapa Bra034957 N
BRADI3G37377 Brachypodium distachyon BRADI3G37377 N
BRADI3G37397 Brachypodium distachyon BRADI3G37397 N
BRADI4G31016 Brachypodium distachyon BRADI4G31016 N
CHLREDRAFT_186244 Chlamydomonas reinhardtii CHLREDRAFT_186244 N
F775_26930 Aegilops tauschii F775_26930 N
fgenesh2_kg.5__785__AT3G43240.1 Arabidopsis lyrata fgenesh2_kg.5__785__AT3G43240.1 N
GLYMA07G05050 Glycine max GLYMA07G05050 N
GLYMA09G08690 Glycine max GLYMA09G08690 N
GLYMA15G20380 Glycine max GLYMA15G20380 N
GLYMA16G01560 Glycine max GLYMA16G01560 N
GRMZM2G138976 Zea mays GRMZM2G138976 N
GRMZM2G140156 Zea mays GRMZM2G140156 N
GRMZM5G866423 Zea mays GRMZM5G866423 N
GSMUA_Achr10G18680_001 Musa acuminata GSMUA_Achr10G18680_001 N
GSMUA_Achr11G09250_001 Musa acuminata GSMUA_Achr11G09250_001 N
GSMUA_Achr3G05790_001 Musa acuminata GSMUA_Achr3G05790_001 N
LPERR09G08040 Leersia perrieri LPERR09G08040 N
MLOC_66426 Hordeum vulgare MLOC_66426 N
MTR_2g044550 Medicago truncatula MTR_2g044550 N
MTR_8g022980 Medicago truncatula MTR_8g022980 N
OB09G17930 Oryza brachyantha OB09G17930 N
OBART08G16790 Oryza barthii OBART08G16790 N
OBART09G11370 Oryza barthii OBART09G11370 N
OGLUM08G17510 Oryza glumaepatula OGLUM08G17510 N
OGLUM09G11760 Oryza glumaepatula OGLUM09G11760 N
OLONG_007387 Oryza longistaminata OLONG_007387 N
OMERI01G15670 Oryza meridionalis OMERI01G15670 N
ONIVA08G18320 Oryza nivara ONIVA08G18320 N
ONIVA09G11150 Oryza nivara ONIVA09G11150 N
OPUNC08G14680 Oryza punctata OPUNC08G14680 N
OPUNC09G09840 Oryza punctata OPUNC09G09840 N
ORGLA08G0146400 Oryza glaberrima ORGLA08G0146400 N
ORGLA09G0085300 Oryza glaberrima ORGLA09G0085300 N
ORUFI08G18650 Oryza rufipogon ORUFI08G18650 N
ORUFI09G12160 Oryza rufipogon ORUFI09G12160 N
OS08G0451400 Oryza sativa OS08G0451400 N
OSTLU_27261 Ostreococcus lucimarinus OSTLU_27261 N
OSTLU_94134 Ostreococcus lucimarinus OSTLU_94134 N
PGSC0003DMG400028852 Solanum tuberosum PGSC0003DMG400028852 N
POPTR_0006s13780 Populus trichocarpa POPTR_0006s13780 N
POPTR_0018s07250 Populus trichocarpa POPTR_0018s07250 N
PRUPE_ppa001668mg Prunus persica PRUPE_ppa001668mg N
Sb02g025515 Sorghum bicolor Sb02g025515 N
Sb07g022155 Sorghum bicolor Sb07g022155 N
SELMODRAFT_431374 Selaginella moellendorffii SELMODRAFT_431374 N
SELMODRAFT_449331 Selaginella moellendorffii SELMODRAFT_449331 N
Si013293m.g Setaria italica Si013293m.g N
Si029019m.g Setaria italica Si029019m.g N
Solyc12g049570.1 Solanum lycopersicum Solyc12g049570.1 N
TCM_037452 Theobroma cacao TCM_037452 N
Traes_5AL_0CF3E9D4A Triticum aestivum Traes_5AL_0CF3E9D4A N
Traes_5BL_114179614 Triticum aestivum Traes_5BL_114179614 N
Traes_5DL_E48356A5C Triticum aestivum Traes_5DL_E48356A5C N
TRIUR3_24005 Triticum urartu TRIUR3_24005 N
VIT_09s0002g00430 Vitis vinifera VIT_09s0002g00430 N
VIT_11s0016g00370 Vitis vinifera VIT_11s0016g00370 N
Ca_16182 Cicer arietinum Ca_16182 N
Ca_18326 Cicer arietinum Ca_18326 N
Cla012753 Citrullus lanatus Cla012753 N
Cla015761 Citrullus lanatus Cla015761 N
Pm013168 Prunus mume Pm013168 N
29739.m003683 Ricinus communis 29739.m003683 N
cassava32082.m1 Manihot esculenta cassava32082.m1 N
cassava33852.m1 Manihot esculenta cassava33852.m1 N
Cucsa.149260 Cucumis sativus Cucsa.149260 N
Cucsa.359860 Cucumis sativus Cucsa.359860 N
e_gw1.53.164.1 Physcomitrella patens e_gw1.53.164.1 N
estExt_fgenesh5_synt.C_400033 Volvox carteri estExt_fgenesh5_synt.C_400033 N
gw1.211.7.1 Physcomitrella patens gw1.211.7.1 N
mgf013854m Mimulus guttatus mgf013854m N
Aquca_013_00919 Aquilegia coerulea Aquca_013_00919 N
Aquca_020_00580 Aquilegia coerulea Aquca_020_00580 N
Bostr.0556s0671 Boechera stricta Bostr.0556s0671 N
Cagra.4079s0001 Capsella grandiflora Cagra.4079s0001 N
Carubv10016730m.g Capsella rubella Carubv10016730m.g N
Ciclev10007563m.g Citrus clementina Ciclev10007563m.g N
estExt_fgenesh1_pg.C_50294 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pg.C_50294 N
Eucgr.C00764 Eucalyptus grandis Eucgr.C00764 N
Eucgr.I02158 Eucalyptus grandis Eucgr.I02158 N
evm.TU.supercontig_82.51 Carica papaya evm.TU.supercontig_82.51 N
gene05453-v1.0-hybrid Fragaria vesca gene05453-v1.0-hybrid N
Gorai.001G018000 Gossypium raimondii Gorai.001G018000 N
Gorai.009G038600 Gossypium raimondii Gorai.009G038600 N
Gorai.010G095800 Gossypium raimondii Gorai.010G095800 N
Lus10027658.g Linum usitatissimum Lus10027658.g N
Lus10039924.g Linum usitatissimum Lus10039924.g N
MDP0000214795 Malus domestica MDP0000214795 N
MDP0000233594 Malus domestica MDP0000233594 N
MDP0000244853 Malus domestica MDP0000244853 N
MDP0000310024 Malus domestica MDP0000310024 N
orange1.1g004566m.g Citrus sinensis orange1.1g004566m.g N
Pavir.Bb02255 Panicum virgatum Pavir.Bb02255 N
Pavir.Fa00815 Panicum virgatum Pavir.Fa00815 N
Pavir.Fb01510 Panicum virgatum Pavir.Fb01510 N
SapurV1A.0121s0150 Salix purpurea SapurV1A.0121s0150 N
SapurV1A.0249s0150 Salix purpurea SapurV1A.0249s0150 N
Thhalv10002415m.g Eutrema salsugineum Thhalv10002415m.g N
PK11738.1 Cannabis sativa PK11738.1 N
estExt_fgeneshCV_pg.C_50315 Chlorella vulgaris estExt_fgeneshCV_pg.C_50315 N
PDK_20s1317301g006 Phoenix dactylifera PDK_20s1317301g006 N
PDK_20s1329251g001 Phoenix dactylifera PDK_20s1329251g001 N
PDK_20s1668051g003 Phoenix dactylifera PDK_20s1668051g003 N