CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0622s0012
(
Capsella grandiflora
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Cagra.0622s0012
T071470_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0622s0012.1.p
bZIP
163
225
NDLKRIRRMYSNRESARRSRRRKQEYLVDLESQVDSLKGENSTLYKQLIDATQQFRSAGTNNR
Cagra.0622s0012.2.p
bZIP
164
220
DLKRIRRESARRSRRRKQEYLVDLESQVDSLKGENSTLYKQLIDATQQFRSAGTNNR
Links
Other
bZIP
family TFs
Other
Capsella grandiflora
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMAR001477
Strigamia maritima
SMAR001477
I
0.000
neurog2.L
Xenopus laevis
XB-GENE-6077660
I
0.000
ENSPSIG00000004125
Pelodiscus sinensis
ENSPSIG00000004125
N
0.000
SMAR010329
Strigamia maritima
SMAR010329
N
0.000
neurog2
Xenopus tropicalis
XB-GENE-491040
N
0.000
neurog2.S
Xenopus laevis
XB-GENE-6252035
N
0.000