CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.4396s0065
(
Capsella grandiflora
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Cagra.4396s0065
T071523_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HYH
M01132_2.00
Arabidopsis thaliana
NNWSACGTGDNN
NNHCACGTSWNN
PBM
Lambert et al.(2019)
pTH9959
0.859
1.000
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.4396s0065.1.p
bZIP
80
144
DKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEKISTLTNENTMLRKMLIN
Links
Other
bZIP
family TFs
Other
Capsella grandiflora
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy