Cagra.8005s0020 (Capsella grandiflora)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Cagra.8005s0020 T071533_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA10
M06783_2.00 		Arabidopsis thaliana
NVTGACGTCAKCDNH
DNHGMTGACGTCABN		 Dap-seq
OMalley et al.(2016)
TGA10_col_a 		0.806 1.000
TGA10
M06784_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA10_colamp_a 		0.806 1.000
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.8005s0020.1.p bZIP 160 209

Links

Other bZIP family TFs
Other Capsella grandiflora TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I
ORGLA11G0183600 Oryza glaberrima ORGLA11G0183600 N