Carubv10016005m.g (Capsella rubella)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Carubv10016005m.g T071575_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP28
M06772_2.00 		Arabidopsis thaliana
DNNDRWSACGTGKCD
HGMCACGTSWYHNNH		 Dap-seq
OMalley et al.(2016)
bZIP28_col_a 		0.880 0.938
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10016005m bZIP 190 253

Links

Other bZIP family TFs
Other Capsella rubella TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_094070 Albugo laibachii ALNC14_094070 N
fgenesh_scip_prom.28083.3952 Phytophthora lateralis fgenesh_scip_prom.28083.3952 N
fgenesh_scip_prom.46568.6049 Phytophthora kernoviae fgenesh_scip_prom.46568.6049 N
maker-pag1_scaffold_40-snap-gene-0.19 Pythium aphanidermatum maker-pag1_scaffold_40-snap-gene-0.19 N
maker-par_contig_42-fgenesh-gene-0.2 Pythium arrhenomanes maker-par_contig_42-fgenesh-gene-0.2 N
maker-pir_contig_468-snap-gene-0.7 Pythium irregulare maker-pir_contig_468-snap-gene-0.7 N
maker-piw_contig_2045-snap-gene-0.2 Pythium iwayamai maker-piw_contig_2045-snap-gene-0.2 N
Phyra80851 Phytophthora ramorum Phyra80851 N
Physo143072 Phytophthora sojae Physo143072 N
PITG_06347 Phytophthora infestans PITG_06347 N
PYU1_G008909 Pythium ultimum PYU1_G008909 N
estExt_fgenesh1_pg.C_2790008 Phytophthora capsici estExt_fgenesh1_pg.C_2790008 N