Ciclev10031441m.g (Citrus clementina)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Ciclev10031441m.g T071656_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA10
M06783_2.00 		Arabidopsis thaliana
NVTGACGTCAKCDNH
DNHGMTGACGTCABN		 Dap-seq
OMalley et al.(2016)
TGA10_col_a 		0.787 0.848
TGA10
M06784_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA10_colamp_a 		0.787 0.848
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10031441m bZIP 178 226

Links

Other bZIP family TFs
Other Citrus clementina TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TGA10 Arabidopsis thaliana AT5G06839 D 0.787
ORGLA05G0158500 Oryza glaberrima ORGLA05G0158500 I 0.787
PDK_20s1736691g001 Phoenix dactylifera PDK_20s1736691g001 I 0.787
Thhalv10014032m.g Eutrema salsugineum Thhalv10014032m.g I 0.787
orange1.1g018357m.g Citrus sinensis orange1.1g018357m.g I 0.802
Eucgr.K01822 Eucalyptus grandis Eucgr.K01822 I 0.787
Eucgr.G02341 Eucalyptus grandis Eucgr.G02341 I 0.787
Carubv10003744m.g Capsella rubella Carubv10003744m.g I 0.787
Cagra.8005s0020 Capsella grandiflora Cagra.8005s0020 I 0.787
Bostr.13129s0288 Boechera stricta Bostr.13129s0288 I 0.787
Solyc11g068370.1 Solanum lycopersicum Solyc11g068370.1 I 0.787
Solyc10g080410.1 Solanum lycopersicum Solyc10g080410.1 I 0.787
Solyc10g078670.1 Solanum lycopersicum Solyc10g078670.1 I 0.783
PGSC0003DMG400023678 Solanum tuberosum PGSC0003DMG400023678 I 0.787
PGSC0003DMG400011430 Solanum tuberosum PGSC0003DMG400011430 I 0.783
OS05G0443900 Oryza sativa OS05G0443900 I 0.787
ORUFI05G19430 Oryza rufipogon ORUFI05G19430 I 0.787
ONIVA05G19180 Oryza nivara ONIVA05G19180 I 0.787
OMERI05G15750 Oryza meridionalis OMERI05G15750 I 0.787
OLONG_005656 Oryza longistaminata OLONG_005656 I 0.787
OGLUM05G19350 Oryza glumaepatula OGLUM05G19350 I 0.787
OBART05G18270 Oryza barthii OBART05G18270 I 0.787
OB05G26080 Oryza brachyantha OB05G26080 I 0.787
LPERR05G14450 Leersia perrieri LPERR05G14450 I 0.787
GSMUA_Achr11G14570_001 Musa acuminata GSMUA_Achr11G14570_001 I 0.783
GLYMA19G32715 Glycine max GLYMA19G32715 I 0.787
GLYMA03G29825 Glycine max GLYMA03G29825 I 0.787
TGA10 Arabidopsis lyrata fgenesh2_kg.6__632__AT5G06839.2 I 0.787
Bo9g175780 Brassica oleracea Bo9g175780 I 0.787
Bo3g004060 Brassica oleracea Bo3g004060 I 0.787
BGIOSGA019942 Oryza indica BGIOSGA019942 I 0.787