Genemark1.5055_g (Coccomyxa subellipsoidea C169)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Genemark1.5055_g T071864_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK23964.1
M01160_2.00 		Cannabis sativa
DNKMCACGTV
BACGTGKMNH		 PBM
Lambert et al.(2019)
pTH10151 		0.825 0.581
BZIP68
M01770_2.00 		Arabidopsis thaliana
BMCASGBND
HNVCSTGKV		 PBM
Weirauch et al.(2014)
pTH8192 		0.822 0.581
BZIP68
M06752_2.00 		Arabidopsis thaliana
DNWKNHSACGTGGCR
YGCCACGTSDNMWNH		 Dap-seq
OMalley et al.(2016)
bZIP68_col_a 		0.822 0.581
BZIP16
M06764_2.00 		Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a 		0.798 0.548
BZIP16
M06765_2.00 		Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a 		0.798 0.548
GBF1
M01783_2.00 		Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD		 PBM
Weirauch et al.(2014)
pTH7259 		0.793 0.581
GBF1
M09913_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_01 		0.793 0.581
GBF1
M09914_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1F_Q2 		0.793 0.581
GBF1
M09915_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2_01 		0.793 0.581
GBF1
M09916_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2 		0.793 0.581
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
56026 bZIP 225 286

Links

Other bZIP family TFs
Other Coccomyxa subellipsoidea C169 TFs

138 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra015737 Brassica rapa Bra015737 N
ENSCSAVG00000005880 Ciona savignyi ENSCSAVG00000005880 N
MESCA003685 Megaselia scalaris MESCA003685 N
MLOC_7381 Hordeum vulgare MLOC_7381 N
PHUM027610 Pediculus humanus PHUM027610 N
gene11760-v1.0-hybrid Fragaria vesca gene11760-v1.0-hybrid N
Genemark1.2983_g Coccomyxa subellipsoidea C169 Genemark1.2983_g N
Pavir.J25952 Panicum virgatum Pavir.J25952 N
HHAL003716-PA Halyomorpha halys HHAL003716-PA N
Sjc_0111140 Schistosoma japonicum Sjc_0111140 N
SMTD_0000131801 Schistosoma mattheei SMTD_0000131801 N
SPER_0000246801 Spirometra erinaceieuropaei SPER_0000246801 N
SPER_0003392901 Spirometra erinaceieuropaei SPER_0003392901 N
SPER_0003827801 Spirometra erinaceieuropaei SPER_0003827801 N
SROB_0001561301 Schistosoma rodhaini SROB_0001561301 N