CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Fb01406
(
Panicum virgatum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Pavir.Fb01406
T072394_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Fb01406.1.p
bZIP
34
97
RMELKRKRRMDSNRESAKRSRQRKQQHLDDLNSQVDQLRTTKQQLITALNITTQNYAVAEAQNS
Links
Other
bZIP
family TFs
Other
Panicum virgatum
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr1G12710_001
Musa acuminata
GSMUA_Achr1G12710_001
I
0.784
GSMUA_Achr1G25340_001
Musa acuminata
GSMUA_Achr1G25340_001
I
0.787
Sb07g015450
Sorghum bicolor
Sb07g015450
N
0.879
Si014523m.g
Setaria italica
Si014523m.g
N
0.879
Cla022814
Citrullus lanatus
Cla022814
N
0.798
cassava1498.valid.m1
Manihot esculenta
cassava1498.valid.m1
N
0.800
cassava42526.valid.m1
Manihot esculenta
cassava42526.valid.m1
N
0.790
Cucsa.248080
Cucumis sativus
Cucsa.248080
N
0.793
Ciclev10002731m.g
Citrus clementina
Ciclev10002731m.g
N
0.786
orange1.1g041765m.g
Citrus sinensis
orange1.1g041765m.g
N
0.786