CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr2.CM0021.50.nd
(
Lotus japonicus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
chr2.CM0021.50.nd
T073219_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATBZIP42
M06775_2.00
Arabidopsis thaliana
TGCTGACGTGGM
KCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_col_a
0.822
0.565
ATBZIP42
M06776_2.00
Arabidopsis thaliana
TGCTGACGTGGCV
BGCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_colamp_a
0.822
0.565
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr2.CM0021.50.nd
bZIP
3
64
DERKRRRMISNRESARRSRMRKQRHLENLRNQVNLFRVENREMKSGLQFLLHQLNRVRTEND
Links
Other
bZIP
family TFs
Other
Lotus japonicus
TFs
144 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GB49391
Apis mellifera
GB49391
N
0.000
MDOA011774
Musca domestica
MDOA011774
N
0.000
LCUP001051
Lucilia cuprina
LCUP001051
N
0.000
CLEC012742
Cimex lectularius
CLEC012742
N
0.000
Hsal_12092--XP_393650.3_APIME
Harpegnathos saltator
Hsal_12092--XP_393650.3_APIME
N
0.000
Cflo_11889--XP_393650.3_APIME
Camponotus floridanus
Cflo_11889--XP_393650.3_APIME
N
0.000
YQE_05911
Dendroctonus ponderosae
YQE_05911
N
0.000
TC015354
Tribolium castaneum
TC015354
N
0.000
SINV15126
Solenopsis invicta
SINV15126
N
0.000
PHUM368740
Pediculus humanus
PHUM368740
N
0.000
L798_10085
Zootermopsis nevadensis
L798_10085
N
0.000
ACYPI080327
Acyrthosiphon pisum
ACYPI080327
N
0.000
GA24806
Drosophila pseudoobscura
FBgn0246191
N
0.000
GE14386
Drosophila yakuba
FBgn0231994
N
0.000
GK23038
Drosophila willistoni
FBgn0225000
N
0.000
GJ20217
Drosophila virilis
FBgn0207357
N
0.000
GM18313
Drosophila sechellia
FBgn0173220
N
0.000
GL17372
Drosophila persimilis
FBgn0154975
N
0.000
GH19977
Drosophila grimshawi
FBgn0127441
N
0.000
GG22949
Drosophila erecta
FBgn0115106
N
0.000
GF11379
Drosophila ananassae
FBgn0088419
N
0.000
CG3328
Drosophila melanogaster
FBgn0034985
N
0.000