CpipJ_CPIJ000614 (Culex pipiens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 CpipJ_CPIJ000614 T077375_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ci
M03672_2.00 		Drosophila melanogaster
NCGMCCACMN
NKGTGGKCGN		 SELEX
Nitta et al.(2015)
ci_1 		0.812 0.930
ci
M06084_2.00 		Drosophila melanogaster
RGMCCACMCAC
GTGKGTGGKCY		 B1H
Zhu et al.(2011)
Ci_SANGER_5_FBgn0004859 		0.812 0.930
ci
M02644_2.00 		Drosophila melanogaster
GACCACCCAMG
CKTGGGTGGTC		 SELEX
Hallikas et al.(2006)
Ci 		0.812 0.930
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ000614-RA C2H2 ZF 299 324
CpipJ_CPIJ000614-RA C2H2 ZF 332 359
CpipJ_CPIJ000614-RA C2H2 ZF 365 389
CpipJ_CPIJ000614-RA C2H2 ZF 395 420
CpipJ_CPIJ000614-RA C2H2 ZF 426 451

Links

Other C2H2 ZF family TFs
Other Culex pipiens TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ci Drosophila melanogaster FBgn0004859 D 0.812
AFAF006125 Anopheles farauti AFAF006125 I 0.822
LotgiG119241 Lottia gigantea LotgiG119241 I 0.796
PHUM413310 Pediculus humanus PHUM413310 I 0.766
TC003000 Tribolium castaneum TC003000 I 0.824
LCUP015520 Lucilia cuprina LCUP015520 I 0.824
LDEC013937 Leptinotarsa decemlineata LDEC013937 I 0.778
Sjc_0091950 Schistosoma japonicum Sjc_0091950 I 0.773
AALB008266 Anopheles albimanus AALB008266 I 0.822
AATE009625 Anopheles atroparvus AATE009625 I 0.822
ACHR002736 Anopheles christyi ACHR002736 I 0.822
ACUA017715 Anopheles culicifacies ACUA017715 I 0.822
ADIR005874 Anopheles dirus ADIR005874 I 0.822
L798_06214 Zootermopsis nevadensis L798_06214 I 0.769
AFUN004511 Anopheles funestus AFUN004511 I 0.822
AMAM007692 Anopheles maculatus AMAM007692 I 0.822
AMIN000086 Anopheles minimus AMIN000086 I 0.822
ASIS001386 Anopheles sinensis ASIS001386 I 0.825
ASTEI06951 Anopheles stephensi ASTEI06951 I 0.822
B_00892 Schistosoma haematobium B_00892 I 0.783
EmuJ_000711000 Echinococcus multilocularis EmuJ_000711000 I 0.794
HmN_000840400 Hymenolepis microstoma HmN_000840400 I 0.792
TsM_000018800 Taenia solium TsM_000018800 I 0.794
GI14119 Drosophila mojavensis FBgn0136873 I 0.803
ADAC002075 Anopheles darlingi ADAC002075 I 0.822
AGAP004637 Anopheles gambiae AGAP004637 I 0.822
BGIBMGA004545 Bombyx mori BGIBMGA004545 I 0.777
CPIJ000614 Culex quinquefasciatus CPIJ000614 I 0.827
ci Drosophila simulans FBgn0012866 I 0.812
ci Drosophila yakuba FBgn0022826 I 0.812
GF19046 Drosophila ananassae FBgn0096058 I 0.775
GG16466 Drosophila erecta FBgn0108697 I 0.812
GH23992 Drosophila grimshawi FBgn0131449 I 0.812
AAEL012039 Aedes aegypti AAEL012039 I 0.825
GL18388 Drosophila persimilis FBgn0155989 I 0.822
GM23237 Drosophila sechellia FBgn0178104 I 0.812
GJ14655 Drosophila virilis FBgn0201862 I 0.812
GK13666 Drosophila willistoni FBgn0215674 I 0.815
GA27838 Drosophila pseudoobscura FBgn0249202 I 0.822
GB54885 Apis mellifera GB54885 I 0.781
ISCW005490 Ixodes scapularis ISCW005490 I 0.771
KGM_04065 Danaus plexippus KGM_04065 I 0.777
DAPPUDRAFT_346973 Daphnia pulex DAPPUDRAFT_346973 N 0.764
YQE_04546 Dendroctonus ponderosae YQE_04546 N 0.770
CGI_10022956 Crassostrea gigas CGI_10022956 N 0.758
HMEL016327 Heliconius melpomene HMEL016327 N 0.761